rs1800386
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in complete genomics |
(A;G) | 3 | association with Von Willebrand disease type 1 |
(G;G) | 3 | association with Von Willebrand disease type 1 |
Reference | GRCh38 38.1/141 |
Chromosome | 12 |
Position | 6018667 |
Gene | VWF |
is a | snp |
is | mentioned by |
dbSNP | rs1800386 |
dbSNP (classic) | rs1800386 |
ClinGen | rs1800386 |
ebi | rs1800386 |
HLI | rs1800386 |
Exac | rs1800386 |
Gnomad | rs1800386 |
Varsome | rs1800386 |
LitVar | rs1800386 |
Map | rs1800386 |
PheGenI | rs1800386 |
Biobank | rs1800386 |
1000 genomes | rs1800386 |
hgdp | rs1800386 |
ensembl | rs1800386 |
geneview | rs1800386 |
scholar | rs1800386 |
rs1800386 | |
pharmgkb | rs1800386 |
gwascentral | rs1800386 |
openSNP | rs1800386 |
23andMe | rs1800386 |
SNPshot | rs1800386 |
SNPdbe | rs1800386 |
MSV3d | rs1800386 |
GWAS Ctlg | rs1800386 |
GMAF | 0.001837 |
Max Magnitude | 3 |
rs1800386, also known as c.4751A>G, p.Tyr1584Cys and T1584C, is a SNP in the VWF gene on chromosome 12.
The rarer rs1800386(G) allele is considered a "risk factor" for Von Willebrand disease, type 1, according to ClinVar and the VWFdb. This mutation is one of the most common VWF mutations in Caucasians, but it is not (fully) causative and has quite variable expressivity and penetrance. This may be due to associations with blood group type O and increased proteolysis of VWF by ADAMTS13.
This SNP is referred to as i3002455 and i5049282 by 23andMe.
ClinVar | |
---|---|
Risk | Rs1800386(G;G) |
Alt | Rs1800386(G;G) |
Reference | Rs1800386(A;A) |
Significance | Other |
Disease | Von Willebrand disease not provided not specified |
Variation | info |
Gene | VWF |
CLNDBN | von Willebrand disease, type 1, susceptibility to not provided not specified |
Reversed | 1 |
HGVS | NC_000012.11:g.6127833T>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000000338.3, RCV000086795.1, RCV000486974.1, |