rs1800944
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| Make rs1800944(C;T) |
| Make rs1800944(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 46373906 |
| Gene | CCR5, LOC102724297 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1800944 |
| dbSNP (classic) | rs1800944 |
| ClinGen | rs1800944 |
| ebi | rs1800944 |
| HLI | rs1800944 |
| Exac | rs1800944 |
| Gnomad | rs1800944 |
| Varsome | rs1800944 |
| LitVar | rs1800944 |
| Map | rs1800944 |
| PheGenI | rs1800944 |
| Biobank | rs1800944 |
| 1000 genomes | rs1800944 |
| hgdp | rs1800944 |
| ensembl | rs1800944 |
| geneview | rs1800944 |
| scholar | rs1800944 |
| rs1800944 | |
| pharmgkb | rs1800944 |
| gwascentral | rs1800944 |
| openSNP | rs1800944 |
| 23andMe | rs1800944 |
| SNPshot | rs1800944 |
| SNPdbe | rs1800944 |
| MSV3d | rs1800944 |
| GWAS Ctlg | rs1800944 |
| GMAF | 0.01148 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs1800944(G;G) rs1800944(T;T) |
| Alt | rs1800944(G;G) rs1800944(T;T) |
| Reference | Rs1800944(C;C) |
| Significance | Non-pathogenic |
| Disease | CCR5 POLYMORPHISM |
| Variation | info |
| Gene | LOC102724297 CCR5 |
| CLNDBN | CCR5 POLYMORPHISM, AFRICAN-AMERICAN |
| Reversed | 0 |
| HGVS | NC_000003.11:g.46415397C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000008669.2, |
[PMID 20206716
] Genetic variation within the gene encoding the HIV-1 CCR5 coreceptor in two South African populations.
