rs1801160
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 3.5 | 5-fluorouracil toxicity (?) |
(A;G) | 2 | Possible 5-fluorouracil toxicity |
(G;G) | 0 | common/normal |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 1 |
Position | 97305364 |
Gene | DPYD, DPYD-AS1 |
is a | snp |
is | mentioned by |
dbSNP | rs1801160 |
dbSNP (classic) | rs1801160 |
ClinGen | rs1801160 |
ebi | rs1801160 |
HLI | rs1801160 |
Exac | rs1801160 |
Gnomad | rs1801160 |
Varsome | rs1801160 |
LitVar | rs1801160 |
Map | rs1801160 |
PheGenI | rs1801160 |
Biobank | rs1801160 |
1000 genomes | rs1801160 |
hgdp | rs1801160 |
ensembl | rs1801160 |
geneview | rs1801160 |
scholar | rs1801160 |
rs1801160 | |
pharmgkb | rs1801160 |
gwascentral | rs1801160 |
openSNP | rs1801160 |
23andMe | rs1801160 |
SNPshot | rs1801160 |
SNPdbe | rs1801160 |
MSV3d | rs1801160 |
GWAS Ctlg | rs1801160 |
Max Magnitude | 3.5 |
rs1801160, also known as V732I or p.Val732Ile, is a variant in the DPYD gene on chromosome 1.
A pharmacogenetic study of ~1,500 colon cancer patients treated with a 5-fluorouracil regimen concluded that patients with a rs1801160(A) allele were at roughly a 2-fold higher risk for an adverse effect (from the fluorouracil). The absolute frequencies of the various adverse effects varied; for example, neutropenia occurred in about 1 in 10 patients (so about 1 in 5 rs1801160(A) carriers).10.1001/jamaoncol.2015.5392
[PMID 26216193] Genotype-phenotype correlations in 5-fluorouracil metabolism: a candidate DPYD haplotype to improve toxicity prediction
ClinVar | |
---|---|
Risk | Rs1801160(A;A) |
Alt | Rs1801160(A;A) |
Reference | Rs1801160(G;G) |
Significance | Probable-non-pathogenic |
Disease | not provided not specified Dihydropyrimidine dehydrogenase deficiency |
Variation | info |
Gene | DPYD-AS1 DPYD |
CLNDBN | not provided not specified Dihydropyrimidine dehydrogenase deficiency |
Reversed | 1 |
HGVS | NC_000001.10:g.97770920C>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000086462.1, RCV000249656.2, RCV000407597.1, |
[PMID 29372689] DPYD genotype and haplotype analysis and colorectal cancer susceptibility in a case-control study from Slovakia.