rs1801673

plus

Geno	Mag	Summary
(A;A)	0	common in complete genomics

Make rs1801673(A;T)

Make rs1801673(T;T)

Reference

GRCh38 38.1/141

Chromosome

11

Position

108304736

Gene

ATM

is a	snp
is	mentioned by
dbSNP	rs1801673
dbSNP (classic)	rs1801673
ClinGen	rs1801673
ebi	rs1801673
HLI	rs1801673
Exac	rs1801673
Gnomad	rs1801673
Varsome	rs1801673
LitVar	rs1801673
Map	rs1801673
PheGenI	rs1801673
Biobank	rs1801673
1000 genomes	rs1801673
hgdp	rs1801673
ensembl	rs1801673
geneview	rs1801673
scholar	rs1801673
google	rs1801673
pharmgkb	rs1801673
gwascentral	rs1801673
openSNP	rs1801673
23andMe	rs1801673
SNPshot	rs1801673
SNPdbe	rs1801673
MSV3d	rs1801673
GWAS Ctlg	rs1801673

GMAF

0.002755

Max Magnitude

0

?

(A;A) (A;T) (T;T)

28

This SNP, a variant in the ATM gene, is 1 of 25 SNPs reported to represent independently minor, but cumulatively significant, increased risk for breast cancer. [PMID 17341484]

For details of all 25 SNPs in this group, along with the two methods used to calculate overall risk estimates for breast cancer, refer to the SNPedia breast cancer entry.

For this particular SNP, the risk (minor) allele is (T).

[PMID 18701470 ] Variants in the ATM gene associated with a reduced risk of contralateral breast cancer.

[PMID 19348699 ] Variants in the ATM gene and breast cancer susceptibility.

ClinVar
Risk	rs1801673(T;T)
Alt	rs1801673(T;T)
Reference	Rs1801673(A;A)
Significance	Probable-non-pathogenic
Disease	not specified Ataxia-telangiectasia syndrome Hereditary cancer-predisposing syndrome
Variation	info
Gene	ATM
CLNDBN	not specified Ataxia-telangiectasia syndrome Hereditary cancer-predisposing syndrome
Reversed	0
HGVS	NC_000011.9:g.108175463A>T
CLNSRC	UniProtKB (protein)
CLNACC	RCV000120145.2, RCV000122859.5, RCV000128902.4,