rs188286943
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 6.5 | Parkinson's disease mutation, adult-onset |
| Make rs188286943(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 46662452 |
| Gene | VPS35 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs188286943 |
| dbSNP (classic) | rs188286943 |
| ClinGen | rs188286943 |
| ebi | rs188286943 |
| HLI | rs188286943 |
| Exac | rs188286943 |
| Gnomad | rs188286943 |
| Varsome | rs188286943 |
| LitVar | rs188286943 |
| Map | rs188286943 |
| PheGenI | rs188286943 |
| Biobank | rs188286943 |
| 1000 genomes | rs188286943 |
| hgdp | rs188286943 |
| ensembl | rs188286943 |
| geneview | rs188286943 |
| scholar | rs188286943 |
| rs188286943 | |
| pharmgkb | rs188286943 |
| gwascentral | rs188286943 |
| openSNP | rs188286943 |
| 23andMe | rs188286943 |
| SNPshot | rs188286943 |
| SNPdbe | rs188286943 |
| MSV3d | rs188286943 |
| GWAS Ctlg | rs188286943 |
| Max Magnitude | 6.5 |
aka c.1858G>A, p.Asp620Asn, D620N
Lengthy discussion on OMIM at 601501.0001
Considered "definitely pathogenic" in the Movement Disorder Society Genetic mutation database (MDSGene) for autosomal dominant Parkinson disease.
| ClinVar | |
|---|---|
| Risk | rs188286943(T;T) |
| Alt | rs188286943(T;T) |
| Reference | Rs188286943(C;C) |
| Significance | Pathogenic |
| Disease | Parkinson disease 17 |
| Variation | info |
| Gene | VPS35 |
| CLNDBN | Parkinson disease 17 |
| Reversed | 0 |
| HGVS | NC_000016.9:g.46696364C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000023115.5, |
