rs1930780
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs1930780(C;C) |
| Make rs1930780(C;G) |
| Make rs1930780(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 120923941 |
| Gene | TRAF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1930780 |
| dbSNP (classic) | rs1930780 |
| ClinGen | rs1930780 |
| ebi | rs1930780 |
| HLI | rs1930780 |
| Exac | rs1930780 |
| Gnomad | rs1930780 |
| Varsome | rs1930780 |
| LitVar | rs1930780 |
| Map | rs1930780 |
| PheGenI | rs1930780 |
| Biobank | rs1930780 |
| 1000 genomes | rs1930780 |
| hgdp | rs1930780 |
| ensembl | rs1930780 |
| geneview | rs1930780 |
| scholar | rs1930780 |
| rs1930780 | |
| pharmgkb | rs1930780 |
| gwascentral | rs1930780 |
| openSNP | rs1930780 |
| 23andMe | rs1930780 |
| SNPshot | rs1930780 |
| SNPdbe | rs1930780 |
| MSV3d | rs1930780 |
| GWAS Ctlg | rs1930780 |
| GMAF | 0.3035 |
| Max Magnitude | 0 |
| ? | (C;C) (C;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs1930780 | |
|---|---|
| PubMed | [PMID 17880261 ]
|
| Affy Probeset | SNP_A-1931921 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | C/G |
| Ancestral | G |
| Population | Caucasian |
| Allele | C |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | 1.36 |
| Odds Ratio Hom | 1.52 |
| Odds Ratio All | 1.42 |
| Disease | Rheumatoid Arthritis (RA) |
rs1930780 is in linkage disequilibrium with a polymorphism that increases susceptibility to Rheumatoid Arthritis 1.36 times for heterozygotes (CG) and 1.52 times for homozygotes (CC) [PMID 17880261]
