rs193302853
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6.1 | Mucolipidosis III gamma |
(-;A) | 3 | Carrier of a mucolipidosis III gamma mutation |
(GTGGGCCTGGCTGGGAGCTGGGTGCTGCCCCTGC;GTGGGCCTGGCTGGGAGCTGGGTGCTGCCCCTGC) | 0 | common in clinvar |
Make rs193302853(-;GTGGGCCTGGCTGGGAGCTGGGTGCTGCCCCTGC) |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 1362562 |
Gene | GNPTG |
is a | snp |
is | mentioned by |
dbSNP | rs193302853 |
dbSNP (classic) | rs193302853 |
ClinGen | rs193302853 |
ebi | rs193302853 |
HLI | rs193302853 |
Exac | rs193302853 |
Gnomad | rs193302853 |
Varsome | rs193302853 |
LitVar | rs193302853 |
Map | rs193302853 |
PheGenI | rs193302853 |
Biobank | rs193302853 |
1000 genomes | rs193302853 |
hgdp | rs193302853 |
ensembl | rs193302853 |
geneview | rs193302853 |
scholar | rs193302853 |
rs193302853 | |
pharmgkb | rs193302853 |
gwascentral | rs193302853 |
openSNP | rs193302853 |
23andMe | rs193302853 |
SNPshot | rs193302853 |
SNPdbe | rs193302853 |
MSV3d | rs193302853 |
GWAS Ctlg | rs193302853 |
Max Magnitude | 6.1 |
c.609+28_610-16del (del34)
Non-coding variant assessed as part of Blueprint Genetics Retinal dystrophy (266 gene) panel.
ClinVar | |
---|---|
Risk | Rs193302853(-;-) |
Alt | Rs193302853(-;-) |
Reference | Rs193302853(GTGGGCCTGGCTGGGAGCTGGGTGCTGCCCCTGC;GTGGGCCTGGCTGGGAGCTGGGTGCTGCCCCTGC) |
Significance | Pathogenic |
Disease | Mucolipidosis III Gamma |
Variation | info |
Gene | GNPTG |
CLNDBN | Mucolipidosis III Gamma |
Reversed | 0 |
HGVS | NC_000016.9:g.1412563_1412596del34 |
CLNSRC | GeneReviews |
CLNACC | RCV000020922.2, |