rs199422272
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
Make rs199422272(C;T) |
Make rs199422272(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 169764945 |
Gene | TERC |
is a | snp |
is | mentioned by |
dbSNP | rs199422272 |
dbSNP (classic) | rs199422272 |
ClinGen | rs199422272 |
ebi | rs199422272 |
HLI | rs199422272 |
Exac | rs199422272 |
Gnomad | rs199422272 |
Varsome | rs199422272 |
LitVar | rs199422272 |
Map | rs199422272 |
PheGenI | rs199422272 |
Biobank | rs199422272 |
1000 genomes | rs199422272 |
hgdp | rs199422272 |
ensembl | rs199422272 |
geneview | rs199422272 |
scholar | rs199422272 |
rs199422272 | |
pharmgkb | rs199422272 |
gwascentral | rs199422272 |
openSNP | rs199422272 |
23andMe | rs199422272 |
SNPshot | rs199422272 |
SNPdbe | rs199422272 |
MSV3d | rs199422272 |
GWAS Ctlg | rs199422272 |
Max Magnitude | 0 |
[PMID 27569544] A Whole-Genome Analysis Framework for Effective Identification of Pathogenic Regulatory Variants in Mendelian Disease. This SNP maps to a position listed in Table S6 as a non-coding variant that their biocurators felt was convincingly associated with a Mendelian disease.
ClinVar | |
---|---|
Risk | rs199422272(T;T) |
Alt | rs199422272(T;T) |
Reference | Rs199422272(C;C) |
Significance | Pathogenic |
Disease | Pulmonary fibrosis and/or bone marrow failure Dyskeratosis congenita autosomal dominant |
Variation | info |
Gene | TERC |
CLNDBN | Pulmonary fibrosis and/or bone marrow failure, telomere-related, 2 Dyskeratosis congenita autosomal dominant |
Reversed | 1 |
HGVS | NC_000003.11:g.169482733G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000007750.2, RCV000032559.1, |