rs199473118
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs199473118(C;T) |
| Make rs199473118(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 38604067 |
| Gene | SCN5A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs199473118 |
| dbSNP (classic) | rs199473118 |
| ClinGen | rs199473118 |
| ebi | rs199473118 |
| HLI | rs199473118 |
| Exac | rs199473118 |
| Gnomad | rs199473118 |
| Varsome | rs199473118 |
| LitVar | rs199473118 |
| Map | rs199473118 |
| PheGenI | rs199473118 |
| Biobank | rs199473118 |
| 1000 genomes | rs199473118 |
| hgdp | rs199473118 |
| ensembl | rs199473118 |
| geneview | rs199473118 |
| scholar | rs199473118 |
| rs199473118 | |
| pharmgkb | rs199473118 |
| gwascentral | rs199473118 |
| openSNP | rs199473118 |
| 23andMe | rs199473118 |
| SNPshot | rs199473118 |
| SNPdbe | rs199473118 |
| MSV3d | rs199473118 |
| GWAS Ctlg | rs199473118 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs199473118(T;T) |
| Alt | rs199473118(T;T) |
| Reference | Rs199473118(C;C) |
| Significance | Pathogenic |
| Disease | Progressive familial heart block type 1A Cardiac conduction defect Brugada syndrome 1 Brugada syndrome |
| Variation | info |
| Gene | SCN5A |
| CLNDBN | Progressive familial heart block type 1A Cardiac conduction defect, nonspecific Brugada syndrome 1 Brugada syndrome |
| Reversed | 1 |
| HGVS | NC_000003.11:g.38645558G>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000010000.3, RCV000058426.3, RCV000144029.2, RCV000234724.1, |
[PMID 12569159
] A common SCN5A polymorphism modulates the biophysical effects of an SCN5A mutation.
