rs199476097
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;T) | 5 | Polycystic Kidney Disease (predicted) |
| (T;T) | 0 | common in clinvar |
| Make rs199476097(A;A) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 2090468 |
| Gene | LOC105371049, MIR1225, PKD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs199476097 |
| dbSNP (classic) | rs199476097 |
| ClinGen | rs199476097 |
| ebi | rs199476097 |
| HLI | rs199476097 |
| Exac | rs199476097 |
| Gnomad | rs199476097 |
| Varsome | rs199476097 |
| LitVar | rs199476097 |
| Map | rs199476097 |
| PheGenI | rs199476097 |
| Biobank | rs199476097 |
| 1000 genomes | rs199476097 |
| hgdp | rs199476097 |
| ensembl | rs199476097 |
| geneview | rs199476097 |
| scholar | rs199476097 |
| rs199476097 | |
| pharmgkb | rs199476097 |
| gwascentral | rs199476097 |
| openSNP | rs199476097 |
| 23andMe | rs199476097 |
| SNPshot | rs199476097 |
| SNPdbe | rs199476097 |
| MSV3d | rs199476097 |
| GWAS Ctlg | rs199476097 |
| Max Magnitude | 5 |
Polycystic Kidney disease; see OMIM 601313.0006
NM_001009944.2:c.12261T>A
The variant allele of this SNP is considered either "definitely pathogenic" or "highly likely pathogenic" for autosomal dominant polycystic kidney disease in the PKD Foundation database.
| ClinVar | |
|---|---|
| Risk | rs199476097(A;A) |
| Alt | rs199476097(A;A) |
| Reference | Rs199476097(T;T) |
| Significance | Pathogenic |
| Disease | Polycystic kidney disease |
| Variation | info |
| Gene | PKD1 MIR1225 LOC105371049 |
| CLNDBN | Polycystic kidney disease, adult type |
| Reversed | 1 |
| HGVS | NC_000016.9:g.2140469A>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000008683.3, |
