rs199476335
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (CTT;CTT) | 0 | common in clinvar |
| (I;I) | 0 | common genotype |
| (TCT;TCT) | 0 | common in clinvar |
| Make rs199476335(-;-) |
| Make rs199476335(-;TCT) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 8745701 |
| Gene | CAV3, SSUH2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs199476335 |
| dbSNP (classic) | rs199476335 |
| ClinGen | rs199476335 |
| ebi | rs199476335 |
| HLI | rs199476335 |
| Exac | rs199476335 |
| Gnomad | rs199476335 |
| Varsome | rs199476335 |
| LitVar | rs199476335 |
| Map | rs199476335 |
| PheGenI | rs199476335 |
| Biobank | rs199476335 |
| 1000 genomes | rs199476335 |
| hgdp | rs199476335 |
| ensembl | rs199476335 |
| geneview | rs199476335 |
| scholar | rs199476335 |
| rs199476335 | |
| pharmgkb | rs199476335 |
| gwascentral | rs199476335 |
| openSNP | rs199476335 |
| 23andMe | rs199476335 |
| SNPshot | rs199476335 |
| SNPdbe | rs199476335 |
| MSV3d | rs199476335 |
| GWAS Ctlg | rs199476335 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs199476335(-;-) |
| Alt | rs199476335(-;-) |
| Reference | Rs199476335(CTT;CTT) |
| Significance | Pathogenic |
| Disease | Creatine phosphokinase Rippling muscle disease 2 Limb-girdle muscular dystrophy not provided not specified |
| Variation | info |
| Gene | SSUH2 CAV3 |
| CLNDBN | Creatine phosphokinase, elevated serum Rippling muscle disease 2 Limb-girdle muscular dystrophy, type 1C not provided not specified |
| Reversed | 0 |
| HGVS | NC_000003.11:g.8787387_8787389delTCT |
| CLNSRC | Leiden Muscular Dystrophy pages (CAV3) OMIM Allelic Variant |
| CLNACC | RCV000008781.3, RCV000008782.4, RCV000008783.3, RCV000024390.1, RCV000347944.1, |
[PMID 14663034] A CAV3 microdeletion differentially affects skeletal muscle and myocardium.
[PMID 17994539] Clinical, molecular, and protein correlations in a large sample of genetically diagnosed Italian limb girdle muscular dystrophy patients.
