rs199588390
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 8 | Brown-Vialetto-Van Laere syndrome type 1 mutation; riboflavin treatment recommended |
| (C;T) | 3 | Carrier of a Brown-Vialetto-Van Laere syndrome mutation |
| (T;T) | 0 | common in clinvar |
| Reference | GRCh38.p2 38.2/147 |
| Chromosome | 20 |
| Position | 765713 |
| Gene | SLC52A3 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs199588390 |
| dbSNP (classic) | rs199588390 |
| ClinGen | rs199588390 |
| ebi | rs199588390 |
| HLI | rs199588390 |
| Exac | rs199588390 |
| Gnomad | rs199588390 |
| Varsome | rs199588390 |
| LitVar | rs199588390 |
| Map | rs199588390 |
| PheGenI | rs199588390 |
| Biobank | rs199588390 |
| 1000 genomes | rs199588390 |
| hgdp | rs199588390 |
| ensembl | rs199588390 |
| geneview | rs199588390 |
| scholar | rs199588390 |
| rs199588390 | |
| pharmgkb | rs199588390 |
| gwascentral | rs199588390 |
| openSNP | rs199588390 |
| 23andMe | rs199588390 |
| SNPshot | rs199588390 |
| SNPdbe | rs199588390 |
| MSV3d | rs199588390 |
| GWAS Ctlg | rs199588390 |
| Max Magnitude | 8 |
| ClinVar | |
|---|---|
| Risk | Rs199588390(C;C) |
| Alt | Rs199588390(C;C) |
| Reference | Rs199588390(T;T) |
| Significance | Pathogenic |
| Disease | Brown-Vialetto-Van Laere syndrome 1 |
| Variation | info |
| Gene | SLC52A3 |
| CLNDBN | Brown-Vialetto-Van Laere syndrome 1 |
| Reversed | 0 |
| HGVS | NC_000020.10:g.746357T>C |
| CLNSRC | |
| CLNACC | RCV000191957.1, |
