rs199665722
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 4 | hypophosphatasia |
(A;G) | 3 | carrier of a hypophosphatasia allele |
(G;G) | 0 | normal |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 1 |
Position | 21568123 |
Gene | ALPL |
is a | snp |
is | mentioned by |
dbSNP | rs199665722 |
dbSNP (classic) | rs199665722 |
ClinGen | rs199665722 |
ebi | rs199665722 |
HLI | rs199665722 |
Exac | rs199665722 |
Gnomad | rs199665722 |
Varsome | rs199665722 |
LitVar | rs199665722 |
Map | rs199665722 |
PheGenI | rs199665722 |
Biobank | rs199665722 |
1000 genomes | rs199665722 |
hgdp | rs199665722 |
ensembl | rs199665722 |
geneview | rs199665722 |
scholar | rs199665722 |
rs199665722 | |
pharmgkb | rs199665722 |
gwascentral | rs199665722 |
openSNP | rs199665722 |
23andMe | rs199665722 |
SNPshot | rs199665722 |
SNPdbe | rs199665722 |
MSV3d | rs199665722 |
GWAS Ctlg | rs199665722 |
Max Magnitude | 4 |
rs199665722, also known as c.668G>A or p.R223Q, is a SNP in the ALPL gene on chromosome 1.
Based on the ALPL gene mutations database, the rare/minor allele is considered pathogenic for the perinatal form of hypophosphatasia.
This SNP is referred to as i6006951 by 23andMe.
ClinVar | |
---|---|
Risk | Rs199665722(A;A) |
Alt | Rs199665722(A;A) |
Reference | Rs199665722(G;G) |
Significance | Probable-Pathogenic |
Disease | not provided |
Variation | info |
Gene | ALPL |
CLNDBN | not provided |
Reversed | 0 |
HGVS | NC_000001.10:g.21894616G>A |
CLNSRC | |
CLNACC | RCV000428517.1, |