rs199847983
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | carrier of one Krabbe disease allele |
| (T;T) | 6 | Krabbe disease (likely) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 14 |
| Position | 87968386 |
| Gene | GALC |
| is a | snp |
| is | mentioned by |
| dbSNP | rs199847983 |
| dbSNP (classic) | rs199847983 |
| ClinGen | rs199847983 |
| ebi | rs199847983 |
| HLI | rs199847983 |
| Exac | rs199847983 |
| Gnomad | rs199847983 |
| Varsome | rs199847983 |
| LitVar | rs199847983 |
| Map | rs199847983 |
| PheGenI | rs199847983 |
| Biobank | rs199847983 |
| 1000 genomes | rs199847983 |
| hgdp | rs199847983 |
| ensembl | rs199847983 |
| geneview | rs199847983 |
| scholar | rs199847983 |
| rs199847983 | |
| pharmgkb | rs199847983 |
| gwascentral | rs199847983 |
| openSNP | rs199847983 |
| 23andMe | rs199847983 |
| SNPshot | rs199847983 |
| SNPdbe | rs199847983 |
| MSV3d | rs199847983 |
| GWAS Ctlg | rs199847983 |
| Max Magnitude | 6 |
aka c.857G>A, p.Gly286Asp
Identified in ClinVar as likely pathogenic/pathogenic for Krabbe disease (when inherited in two copies or as a compound heterozygote)
| ClinVar | |
|---|---|
| Risk | Rs199847983(T;T) |
| Alt | Rs199847983(T;T) |
| Reference | Rs199847983(C;C) |
| Significance | Other |
| Disease | Galactosylceramide beta-galactosidase deficiency not provided |
| Variation | info |
| Gene | GALC |
| CLNDBN | Galactosylceramide beta-galactosidase deficiency not provided |
| Reversed | 0 |
| HGVS | NC_000014.8:g.88434730C>T |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000023593.4, RCV000363446.1, |
