rs199847983
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | carrier of one Krabbe disease allele |
(T;T) | 6 | Krabbe disease (likely) |
Reference | GRCh38 38.1/141 |
Chromosome | 14 |
Position | 87968386 |
Gene | GALC |
is a | snp |
is | mentioned by |
dbSNP | rs199847983 |
dbSNP (classic) | rs199847983 |
ClinGen | rs199847983 |
ebi | rs199847983 |
HLI | rs199847983 |
Exac | rs199847983 |
Gnomad | rs199847983 |
Varsome | rs199847983 |
LitVar | rs199847983 |
Map | rs199847983 |
PheGenI | rs199847983 |
Biobank | rs199847983 |
1000 genomes | rs199847983 |
hgdp | rs199847983 |
ensembl | rs199847983 |
geneview | rs199847983 |
scholar | rs199847983 |
rs199847983 | |
pharmgkb | rs199847983 |
gwascentral | rs199847983 |
openSNP | rs199847983 |
23andMe | rs199847983 |
SNPshot | rs199847983 |
SNPdbe | rs199847983 |
MSV3d | rs199847983 |
GWAS Ctlg | rs199847983 |
Max Magnitude | 6 |
aka c.857G>A, p.Gly286Asp
Identified in ClinVar as likely pathogenic/pathogenic for Krabbe disease (when inherited in two copies or as a compound heterozygote)
ClinVar | |
---|---|
Risk | Rs199847983(T;T) |
Alt | Rs199847983(T;T) |
Reference | Rs199847983(C;C) |
Significance | Other |
Disease | Galactosylceramide beta-galactosidase deficiency not provided |
Variation | info |
Gene | GALC |
CLNDBN | Galactosylceramide beta-galactosidase deficiency not provided |
Reversed | 0 |
HGVS | NC_000014.8:g.88434730C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000023593.4, RCV000363446.1, |