rs200079802
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs200079802(C;G) |
| Make rs200079802(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 15 |
| Position | 44563302 |
| Gene | EIF3J, SPG11 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs200079802 |
| dbSNP (classic) | rs200079802 |
| ClinGen | rs200079802 |
| ebi | rs200079802 |
| HLI | rs200079802 |
| Exac | rs200079802 |
| Gnomad | rs200079802 |
| Varsome | rs200079802 |
| LitVar | rs200079802 |
| Map | rs200079802 |
| PheGenI | rs200079802 |
| Biobank | rs200079802 |
| 1000 genomes | rs200079802 |
| hgdp | rs200079802 |
| ensembl | rs200079802 |
| geneview | rs200079802 |
| scholar | rs200079802 |
| rs200079802 | |
| pharmgkb | rs200079802 |
| gwascentral | rs200079802 |
| openSNP | rs200079802 |
| 23andMe | rs200079802 |
| SNPshot | rs200079802 |
| SNPdbe | rs200079802 |
| MSV3d | rs200079802 |
| GWAS Ctlg | rs200079802 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs200079802(G;G) |
| Alt | rs200079802(G;G) |
| Reference | Rs200079802(C;C) |
| Significance | Pathogenic |
| Disease | Spastic paraplegia 11 |
| Variation | info |
| Gene | SPG11 EIF3J |
| CLNDBN | Spastic paraplegia 11, autosomal recessive |
| Reversed | 0 |
| HGVS | NC_000015.9:g.44855500C>G |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000001174.4, |
[PMID 19194956] SPG11 mutations cause Kjellin syndrome, a hereditary spastic paraplegia with thin corpus callosum and central retinal degeneration.
