rs200378205
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | carrier of one Krabbe disease allele |
| (T;T) | 6 | Krabbe disease (likely) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 14 |
| Position | 87945631 |
| Gene | GALC |
| is a | snp |
| is | mentioned by |
| dbSNP | rs200378205 |
| dbSNP (classic) | rs200378205 |
| ClinGen | rs200378205 |
| ebi | rs200378205 |
| HLI | rs200378205 |
| Exac | rs200378205 |
| Gnomad | rs200378205 |
| Varsome | rs200378205 |
| LitVar | rs200378205 |
| Map | rs200378205 |
| PheGenI | rs200378205 |
| Biobank | rs200378205 |
| 1000 genomes | rs200378205 |
| hgdp | rs200378205 |
| ensembl | rs200378205 |
| geneview | rs200378205 |
| scholar | rs200378205 |
| rs200378205 | |
| pharmgkb | rs200378205 |
| gwascentral | rs200378205 |
| openSNP | rs200378205 |
| 23andMe | rs200378205 |
| SNPshot | rs200378205 |
| SNPdbe | rs200378205 |
| MSV3d | rs200378205 |
| GWAS Ctlg | rs200378205 |
| Max Magnitude | 6 |
aka c.1592G>A, p.Arg531His
Identified in ClinVar as pathogenic for Krabbe disease (when inherited recessively or as a compound heterozygote)
| ClinVar | |
|---|---|
| Risk | Rs200378205(T;T) |
| Alt | Rs200378205(T;T) |
| Reference | Rs200378205(C;C) |
| Significance | Other |
| Disease | not provided Galactosylceramide beta-galactosidase deficiency |
| Variation | info |
| Gene | GALC |
| CLNDBN | not provided Galactosylceramide beta-galactosidase deficiency |
| Reversed | 0 |
| HGVS | NC_000014.8:g.88411975C>T |
| CLNSRC | HGMD |
| CLNACC | RCV000153296.2, RCV000174662.1, |
