rs200378205
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | carrier of one Krabbe disease allele |
(T;T) | 6 | Krabbe disease (likely) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 14 |
Position | 87945631 |
Gene | GALC |
is a | snp |
is | mentioned by |
dbSNP | rs200378205 |
dbSNP (classic) | rs200378205 |
ClinGen | rs200378205 |
ebi | rs200378205 |
HLI | rs200378205 |
Exac | rs200378205 |
Gnomad | rs200378205 |
Varsome | rs200378205 |
LitVar | rs200378205 |
Map | rs200378205 |
PheGenI | rs200378205 |
Biobank | rs200378205 |
1000 genomes | rs200378205 |
hgdp | rs200378205 |
ensembl | rs200378205 |
geneview | rs200378205 |
scholar | rs200378205 |
rs200378205 | |
pharmgkb | rs200378205 |
gwascentral | rs200378205 |
openSNP | rs200378205 |
23andMe | rs200378205 |
SNPshot | rs200378205 |
SNPdbe | rs200378205 |
MSV3d | rs200378205 |
GWAS Ctlg | rs200378205 |
Max Magnitude | 6 |
aka c.1592G>A, p.Arg531His
Identified in ClinVar as pathogenic for Krabbe disease (when inherited recessively or as a compound heterozygote)
ClinVar | |
---|---|
Risk | Rs200378205(T;T) |
Alt | Rs200378205(T;T) |
Reference | Rs200378205(C;C) |
Significance | Other |
Disease | not provided Galactosylceramide beta-galactosidase deficiency |
Variation | info |
Gene | GALC |
CLNDBN | not provided Galactosylceramide beta-galactosidase deficiency |
Reversed | 0 |
HGVS | NC_000014.8:g.88411975C>T |
CLNSRC | HGMD |
CLNACC | RCV000153296.2, RCV000174662.1, |