rs201540674
From SNPedia
					| Orientation | plus | 
| Stabilized | plus | 
| Geno | Mag | Summary | 
|---|---|---|
| (A;G) | 3 | Carrier of a dyskeratosis congenita (recessive) mutation | 
| (G;G) | 0 | common in clinvar | 
| Make rs201540674(A;A) | 
| Reference | GRCh38 38.1/142 | 
| Chromosome | 20 | 
| Position | 63695619 | 
| Gene | RTEL1, RTEL1-TNFRSF6B, TNFRSF6B | 
| is a | snp | 
| is | mentioned by | 
| dbSNP | rs201540674 | 
| dbSNP (classic) | rs201540674 | 
| ClinGen | rs201540674 | 
| ebi | rs201540674 | 
| HLI | rs201540674 | 
| Exac | rs201540674 | 
| Gnomad | rs201540674 | 
| Varsome | rs201540674 | 
| LitVar | rs201540674 | 
| Map | rs201540674 | 
| PheGenI | rs201540674 | 
| Biobank | rs201540674 | 
| 1000 genomes | rs201540674 | 
| hgdp | rs201540674 | 
| ensembl | rs201540674 | 
| geneview | rs201540674 | 
| scholar | rs201540674 | 
| rs201540674 | |
| pharmgkb | rs201540674 | 
| gwascentral | rs201540674 | 
| openSNP | rs201540674 | 
| 23andMe | rs201540674 | 
| SNPshot | rs201540674 | 
| SNPdbe | rs201540674 | 
| MSV3d | rs201540674 | 
| GWAS Ctlg | rs201540674 | 
| Max Magnitude | 3 | 
aka c.2402G>A (p.Arg801His or R80H)
Note that this variant is also called c.3791G>A (p.Arg1264His or R1264H) when numbering using a different reference sequence is used; for an example, see the 2014 paper that concluded that this variant is likely to be a founder mutation in Ashkenazi Jews and should be included in carrier screens.[PMID 25047097]
news article from January 2019 discusses the search for a cure
| ClinVar | |
|---|---|
| Risk | rs201540674(A;A) | 
| Alt | rs201540674(A;A) | 
| Reference | Rs201540674(G;G) | 
| Significance | Other | 
| Disease | Dyskeratosis congenita Pulmonary fibrosis and/or bone marrow failure Idiopathic fibrosing alveolitis | 
| Variation | info | 
| Gene | RTEL1-TNFRSF6B RTEL1 TNFRSF6B | 
| CLNDBN | Dyskeratosis congenita, autosomal recessive, 5 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 Idiopathic fibrosing alveolitis, chronic form | 
| Reversed | 0 | 
| HGVS | NC_000020.10:g.62326972G>A | 
| CLNSRC | OMIM Allelic Variant | 
| CLNACC | RCV000034860.8, RCV000201217.3, RCV000201662.1, | 
