rs201540674
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 3 | Carrier of a dyskeratosis congenita (recessive) mutation |
(G;G) | 0 | common in clinvar |
Make rs201540674(A;A) |
Reference | GRCh38 38.1/142 |
Chromosome | 20 |
Position | 63695619 |
Gene | RTEL1, RTEL1-TNFRSF6B, TNFRSF6B |
is a | snp |
is | mentioned by |
dbSNP | rs201540674 |
dbSNP (classic) | rs201540674 |
ClinGen | rs201540674 |
ebi | rs201540674 |
HLI | rs201540674 |
Exac | rs201540674 |
Gnomad | rs201540674 |
Varsome | rs201540674 |
LitVar | rs201540674 |
Map | rs201540674 |
PheGenI | rs201540674 |
Biobank | rs201540674 |
1000 genomes | rs201540674 |
hgdp | rs201540674 |
ensembl | rs201540674 |
geneview | rs201540674 |
scholar | rs201540674 |
rs201540674 | |
pharmgkb | rs201540674 |
gwascentral | rs201540674 |
openSNP | rs201540674 |
23andMe | rs201540674 |
SNPshot | rs201540674 |
SNPdbe | rs201540674 |
MSV3d | rs201540674 |
GWAS Ctlg | rs201540674 |
Max Magnitude | 3 |
aka c.2402G>A (p.Arg801His or R80H)
Note that this variant is also called c.3791G>A (p.Arg1264His or R1264H) when numbering using a different reference sequence is used; for an example, see the 2014 paper that concluded that this variant is likely to be a founder mutation in Ashkenazi Jews and should be included in carrier screens.[PMID 25047097]
news article from January 2019 discusses the search for a cure
ClinVar | |
---|---|
Risk | rs201540674(A;A) |
Alt | rs201540674(A;A) |
Reference | Rs201540674(G;G) |
Significance | Other |
Disease | Dyskeratosis congenita Pulmonary fibrosis and/or bone marrow failure Idiopathic fibrosing alveolitis |
Variation | info |
Gene | RTEL1-TNFRSF6B RTEL1 TNFRSF6B |
CLNDBN | Dyskeratosis congenita, autosomal recessive, 5 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 Idiopathic fibrosing alveolitis, chronic form |
Reversed | 0 |
HGVS | NC_000020.10:g.62326972G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000034860.8, RCV000201217.3, RCV000201662.1, |