rs2229813
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 1 | slight increase possibly in risk for keratoconus |
(A;G) | 1 | slight increase possibly in risk for keratoconus |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/142 |
Chromosome | 2 |
Position | 227028004 |
Gene | COL4A4 |
is a | snp |
is | mentioned by |
dbSNP | rs2229813 |
dbSNP (classic) | rs2229813 |
ClinGen | rs2229813 |
ebi | rs2229813 |
HLI | rs2229813 |
Exac | rs2229813 |
Gnomad | rs2229813 |
Varsome | rs2229813 |
LitVar | rs2229813 |
Map | rs2229813 |
PheGenI | rs2229813 |
Biobank | rs2229813 |
1000 genomes | rs2229813 |
hgdp | rs2229813 |
ensembl | rs2229813 |
geneview | rs2229813 |
scholar | rs2229813 |
rs2229813 | |
pharmgkb | rs2229813 |
gwascentral | rs2229813 |
openSNP | rs2229813 |
23andMe | rs2229813 |
SNPshot | rs2229813 |
SNPdbe | rs2229813 |
MSV3d | rs2229813 |
GWAS Ctlg | rs2229813 |
Max Magnitude | 1 |
[PMID 25651396] Evaluation of Possible Relationship Between COL4A4 Gene Polymorphisms and Risk of Keratoconus
ClinVar | |
---|---|
Risk | Rs2229813(A;A) |
Alt | Rs2229813(A;A) |
Reference | Rs2229813(G;G) |
Significance | Probable-Pathogenic |
Disease | not provided not specified Alport syndrome |
Variation | info |
Gene | COL4A4 |
CLNDBN | not provided not specified Alport syndrome |
Reversed | 1 |
HGVS | NC_000002.11:g.227892720C>T |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000171504.1, RCV000246048.1, RCV000271269.1, |