rs2229882
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common genotype |
| Make rs2229882(C;T) |
| Make rs2229882(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 5 |
| Position | 56872885 |
| Gene | MAP3K1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2229882 |
| dbSNP (classic) | rs2229882 |
| ClinGen | rs2229882 |
| ebi | rs2229882 |
| HLI | rs2229882 |
| Exac | rs2229882 |
| Gnomad | rs2229882 |
| Varsome | rs2229882 |
| LitVar | rs2229882 |
| Map | rs2229882 |
| PheGenI | rs2229882 |
| Biobank | rs2229882 |
| 1000 genomes | rs2229882 |
| hgdp | rs2229882 |
| ensembl | rs2229882 |
| geneview | rs2229882 |
| scholar | rs2229882 |
| rs2229882 | |
| pharmgkb | rs2229882 |
| gwascentral | rs2229882 |
| openSNP | rs2229882 |
| 23andMe | rs2229882 |
| SNPshot | rs2229882 |
| SNPdbe | rs2229882 |
| MSV3d | rs2229882 |
| GWAS Ctlg | rs2229882 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 24493630 ]
|
| Trait | Breast cancer (early onset) |
| Title | A genome-wide association study of early-onset breast cancer identifies PFKM as a novel breast cancer gene and supports a common genetic spectrum for breast cancer at any age. |
| Risk Allele | |
| P-val | 1E-14 |
| Odds Ratio | 1.45 [1.32-1.60] |
