rs2242944
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 1 | 0.7x lower odds of ankylosing spondylitis, according to 23andMe |
| Make rs2242944(A;G) |
| Make rs2242944(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 21 |
| Position | 39093252 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2242944 |
| dbSNP (classic) | rs2242944 |
| ClinGen | rs2242944 |
| ebi | rs2242944 |
| HLI | rs2242944 |
| Exac | rs2242944 |
| Gnomad | rs2242944 |
| Varsome | rs2242944 |
| LitVar | rs2242944 |
| Map | rs2242944 |
| PheGenI | rs2242944 |
| Biobank | rs2242944 |
| 1000 genomes | rs2242944 |
| hgdp | rs2242944 |
| ensembl | rs2242944 |
| geneview | rs2242944 |
| scholar | rs2242944 |
| rs2242944 | |
| pharmgkb | rs2242944 |
| gwascentral | rs2242944 |
| openSNP | rs2242944 |
| 23andMe | rs2242944 |
| SNPshot | rs2242944 |
| SNPdbe | rs2242944 |
| MSV3d | rs2242944 |
| GWAS Ctlg | rs2242944 |
| GMAF | 0.4729 |
| Max Magnitude | 1 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20062062 ]
|
| Trait | Ankylosing spondylitis |
| Title | Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci |
| Risk Allele | A |
| P-val | 8E-20 |
| Odds Ratio | 1.39 [1.28-1.49] |
23andMe reports that the GG genotype at rs2242944 is associated with 1.4x higher odds of ankylosing spondylitis, and the AA genotype is associated with 0.7x lower odds. [PMID 20062062]
[PMID 20810504] Association of the intergenic single-nucleotide polymorphism rs10865331 (2p15) with ankylosing spondylitis in a Spanish population.
