rs227731
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Make rs227731(A;A) |
| Make rs227731(A;C) |
| Make rs227731(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 56695877 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs227731 |
| dbSNP (classic) | rs227731 |
| ClinGen | rs227731 |
| ebi | rs227731 |
| HLI | rs227731 |
| Exac | rs227731 |
| Gnomad | rs227731 |
| Varsome | rs227731 |
| LitVar | rs227731 |
| Map | rs227731 |
| PheGenI | rs227731 |
| Biobank | rs227731 |
| 1000 genomes | rs227731 |
| hgdp | rs227731 |
| ensembl | rs227731 |
| geneview | rs227731 |
| scholar | rs227731 |
| rs227731 | |
| pharmgkb | rs227731 |
| gwascentral | rs227731 |
| openSNP | rs227731 |
| 23andMe | rs227731 |
| SNPshot | rs227731 |
| SNPdbe | rs227731 |
| MSV3d | rs227731 |
| GWAS Ctlg | rs227731 |
| GMAF | 0.4876 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20023658] |
| Trait | Nonsyndromic cleft lip with or without cleft palate |
| Title | Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate |
| Risk Allele | C |
| P-val | 1E-8 |
| Odds Ratio | 1.38 [1.21-1.56] |
[PMID 22021054] Polymorphic variants at 10q25.3 and 17q22 loci and the risk of non-syndromic cleft lip and palate in the Polish population.
Associated with European Facial Appearance 10.1371/journal.pgen.1002932
| GWAS snp | |
|---|---|
| PMID | [PMID 22863734 ]
|
| Trait | Orofacial clefts |
| Title | Genome-wide meta-analyses of nonsyndromic cleft lip with or without cleft palate identify six new risk loci. |
| Risk Allele | C |
| P-val | 2E-8 |
| Odds Ratio | 1.23 [1.078-1.400] |
[PMID 28422192] Polymorphisms at 1q32, 8q24, and 17q22 loci are associated with nonsyndromic cleft lip with or without cleft palate risk in the Slovak population.
[PMID 32617779] Machine learning in prediction of genetic risk of nonsyndromic oral clefts in the Brazilian population.
