rs2416804
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs2416804(C;C) |
| Make rs2416804(C;G) |
| Make rs2416804(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 9 |
| Position | 120914118 |
| Gene | TRAF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2416804 |
| dbSNP (classic) | rs2416804 |
| ClinGen | rs2416804 |
| ebi | rs2416804 |
| HLI | rs2416804 |
| Exac | rs2416804 |
| Gnomad | rs2416804 |
| Varsome | rs2416804 |
| LitVar | rs2416804 |
| Map | rs2416804 |
| PheGenI | rs2416804 |
| Biobank | rs2416804 |
| 1000 genomes | rs2416804 |
| hgdp | rs2416804 |
| ensembl | rs2416804 |
| geneview | rs2416804 |
| scholar | rs2416804 |
| rs2416804 | |
| pharmgkb | rs2416804 |
| gwascentral | rs2416804 |
| openSNP | rs2416804 |
| 23andMe | rs2416804 |
| SNPshot | rs2416804 |
| SNPdbe | rs2416804 |
| MSV3d | rs2416804 |
| GWAS Ctlg | rs2416804 |
| GMAF | 0.4518 |
| Max Magnitude | 0 |
| ? | (C;C) (C;G) (G;G) | 28 |
|---|---|---|
|
| ||
| Rs2416804 | |
|---|---|
| PubMed | [PMID 17880261 ]
|
| Affy Probeset | SNP_A-1997910 |
| Affy Orientation | same |
| On GW 5.0 | 1 |
| Alleles A/B | C/G |
| Ancestral | G |
| Population | European |
| Allele | G |
| Case Freq. | 0.5 |
| Control Freq. | 0.42 |
| Odds Ratio Het | 1.25 |
| Odds Ratio Hom | 1.63 |
| Odds Ratio All | 1.37 |
| Disease | Rheumatoid Arthritis (RA) |
rs2416804 increases susceptibility to Rheumatoid Arthritis 1.25 times for heterozygotes (CG) and 1.63 times for homozygotes (GG) [PMID 17880261]
