rs267606858
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 3 | Likely miscall in DNA chip data, such as that from Ancestry or 23andMe; otherwise, carrier of a glycogen storage disease mutation |
| (T;T) | 5 | Likely miscall in DNA-chip based data, such as that from Ancestry or 23andMe; otherwise, Glycogen storage disease XV |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 148996406 |
| Gene | GYG1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs267606858 |
| dbSNP (classic) | rs267606858 |
| ClinGen | rs267606858 |
| ebi | rs267606858 |
| HLI | rs267606858 |
| Exac | rs267606858 |
| Gnomad | rs267606858 |
| Varsome | rs267606858 |
| LitVar | rs267606858 |
| Map | rs267606858 |
| PheGenI | rs267606858 |
| Biobank | rs267606858 |
| 1000 genomes | rs267606858 |
| hgdp | rs267606858 |
| ensembl | rs267606858 |
| geneview | rs267606858 |
| scholar | rs267606858 |
| rs267606858 | |
| pharmgkb | rs267606858 |
| gwascentral | rs267606858 |
| openSNP | rs267606858 |
| 23andMe | rs267606858 |
| SNPshot | rs267606858 |
| SNPdbe | rs267606858 |
| MSV3d | rs267606858 |
| GWAS Ctlg | rs267606858 |
| Max Magnitude | 5 |
rs267606858, also known as c.248C>T, p.Thr83Met and T83M, represents a very rare mutation in the GYG1 gene on chromosome 3.
The rs267606858(T) mutation is considered pathogenic for glycogen storage disease XV, a recessively inherited disease, based on data in ClinVar and OMIM.
All DNA chip-based direct-to-consumer tests that we (SNPedia/Promethease) know about, such as those from Ancestry or 23andMe, appear to have a very high false-positive error rate for this SNP.
| ClinVar | |
|---|---|
| Risk | rs267606858(G;G) Rs267606858(T;T) |
| Alt | rs267606858(G;G) Rs267606858(T;T) |
| Reference | Rs267606858(C;C) |
| Significance | Pathogenic |
| Disease | Glycogen storage disease XV |
| Variation | info |
| Gene | GYG1 |
| CLNDBN | Glycogen storage disease XV |
| Reversed | 0 |
| HGVS | NC_000003.11:g.148714193C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000006318.5, |
