rs267607920
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (-;T) | 6 | Lynch syndrome |
| (-;TT) | 6 | Lynch syndrome, pathogenic mutation |
| (TT;TT) | 0 | common in clinvar |
| Make rs267607920(-;-) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 47408452 |
| Gene | MSH2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs267607920 |
| dbSNP (classic) | rs267607920 |
| ClinGen | rs267607920 |
| ebi | rs267607920 |
| HLI | rs267607920 |
| Exac | rs267607920 |
| Gnomad | rs267607920 |
| Varsome | rs267607920 |
| LitVar | rs267607920 |
| Map | rs267607920 |
| PheGenI | rs267607920 |
| Biobank | rs267607920 |
| 1000 genomes | rs267607920 |
| hgdp | rs267607920 |
| ensembl | rs267607920 |
| geneview | rs267607920 |
| scholar | rs267607920 |
| rs267607920 | |
| pharmgkb | rs267607920 |
| gwascentral | rs267607920 |
| openSNP | rs267607920 |
| 23andMe | rs267607920 |
| SNPshot | rs267607920 |
| SNPdbe | rs267607920 |
| MSV3d | rs267607920 |
| GWAS Ctlg | rs267607920 |
| Max Magnitude | 6 |
aka both c.264dupT as well as c.263_264delTT
| ClinVar | |
|---|---|
| Risk | rs267607920(-;-) |
| Alt | rs267607920(-;-) |
| Reference | Rs267607920(TT;TT) |
| Significance | Pathogenic |
| Disease | Lynch syndrome |
| Variation | info |
| Gene | MSH2 |
| CLNDBN | Lynch syndrome |
| Reversed | 0 |
| HGVS | NC_000002.11:g.47635591_47635592delTT |
| CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
| CLNACC | RCV000076531.2, |
