rs281865117
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;-) | 6 | neurodegenerative disorder (ARSACS) |
| (-;T) | 3 | carrier of a neurodegenerative disorder (ARSACS) mutation |
| (T;T) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 13 |
| Position | 23335032 |
| Gene | SACS |
| is a | snp |
| is | mentioned by |
| dbSNP | rs281865117 |
| dbSNP (classic) | rs281865117 |
| ClinGen | rs281865117 |
| ebi | rs281865117 |
| HLI | rs281865117 |
| Exac | rs281865117 |
| Gnomad | rs281865117 |
| Varsome | rs281865117 |
| LitVar | rs281865117 |
| Map | rs281865117 |
| PheGenI | rs281865117 |
| Biobank | rs281865117 |
| 1000 genomes | rs281865117 |
| hgdp | rs281865117 |
| ensembl | rs281865117 |
| geneview | rs281865117 |
| scholar | rs281865117 |
| rs281865117 | |
| pharmgkb | rs281865117 |
| gwascentral | rs281865117 |
| openSNP | rs281865117 |
| 23andMe | rs281865117 |
| SNPshot | rs281865117 |
| SNPdbe | rs281865117 |
| MSV3d | rs281865117 |
| GWAS Ctlg | rs281865117 |
| Max Magnitude | 6 |
c.8844delT (p.Ile2949Phefs)
23andMe name: i5012578
| ClinVar | |
|---|---|
| Risk | Rs281865117(-;-) |
| Alt | Rs281865117(-;-) |
| Reference | Rs281865117(T;T) |
| Significance | Pathogenic |
| Disease | Spastic ataxia Charlevoix-Saguenay type not provided Spastic paraplegia |
| Variation | info |
| Gene | SACS |
| CLNDBN | Spastic ataxia Charlevoix-Saguenay type not provided Spastic paraplegia |
| Reversed | 1 |
| HGVS | NC_000013.10:g.23909171delA |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000005847.4, RCV000338359.1, RCV000460039.1, |
[PMID 10655055] ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF.
