rs281865192
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;G) | 3 | carrier of one Leber Congenital Amaurosis allele |
(G;G) | 6 | Leber Congenital Amaurosis (blindness) |
Reference | GRCh38 38.1/141 |
Chromosome | 12 |
Position | 88101183 |
Gene | CEP290 |
is a | snp |
is | mentioned by |
dbSNP | rs281865192 |
dbSNP (classic) | rs281865192 |
ClinGen | rs281865192 |
ebi | rs281865192 |
HLI | rs281865192 |
Exac | rs281865192 |
Gnomad | rs281865192 |
Varsome | rs281865192 |
LitVar | rs281865192 |
Map | rs281865192 |
PheGenI | rs281865192 |
Biobank | rs281865192 |
1000 genomes | rs281865192 |
hgdp | rs281865192 |
ensembl | rs281865192 |
geneview | rs281865192 |
scholar | rs281865192 |
rs281865192 | |
pharmgkb | rs281865192 |
gwascentral | rs281865192 |
openSNP | rs281865192 |
23andMe | rs281865192 |
SNPshot | rs281865192 |
SNPdbe | rs281865192 |
MSV3d | rs281865192 |
GWAS Ctlg | rs281865192 |
Max Magnitude | 6 |
rs281865192, also known as c.2991+1655A>G and p.Cys998X, is a mutation in the CEP290 gene on chromosome 12.
When inherited in a recessive manner, the rs281865192(G) allele is reported to lead to Leber Congenital Amaurosis, the most common form of congenital blindness. This mutation is considered the most common LCA mutation in the CEP290 gene.[PMID 16909394]
A company, ProQR Therapeutics, is developing a therapeutic to specifically treat LCA patients carrying Cys998X mutations.
Also: Non-coding variant assessed as part of Blueprint Genetics Retinal dystrophy (266 gene) panel.
ClinVar | |
---|---|
Risk | Rs281865192(G;G) |
Alt | Rs281865192(G;G) |
Reference | Rs281865192(A;A) |
Significance | Pathogenic |
Disease | Leber congenital amaurosis 10 not provided Joubert syndrome 5 |
Variation | info |
Gene | CEP290 |
CLNDBN | Leber congenital amaurosis 10 not provided Joubert syndrome 5 |
Reversed | 1 |
HGVS | NC_000012.11:g.88494960T>C |
CLNSRC | HGMD OMIM Allelic Variant |
CLNACC | RCV000001400.6, RCV000086286.2, RCV000301403.1, |
[PMID 16909394] Mutations in the CEP290 (NPHP6) gene are a frequent cause of Leber congenital amaurosis.