rs281875251
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| (G;T) | 3 | carrier of factor XI mutation |
| (T;T) | 5 | Factor XI deficiency |
| Make rs281875251(A;A) |
| Make rs281875251(A;G) |
| Reference | GRCh38.p7 38.3/150 |
| Chromosome | 4 |
| Position | 186288525 |
| Gene | F11, F11-AS1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs281875251 |
| dbSNP (classic) | rs281875251 |
| ClinGen | rs281875251 |
| ebi | rs281875251 |
| HLI | rs281875251 |
| Exac | rs281875251 |
| Gnomad | rs281875251 |
| Varsome | rs281875251 |
| LitVar | rs281875251 |
| Map | rs281875251 |
| PheGenI | rs281875251 |
| Biobank | rs281875251 |
| 1000 genomes | rs281875251 |
| hgdp | rs281875251 |
| ensembl | rs281875251 |
| geneview | rs281875251 |
| scholar | rs281875251 |
| rs281875251 | |
| pharmgkb | rs281875251 |
| gwascentral | rs281875251 |
| openSNP | rs281875251 |
| 23andMe | rs281875251 |
| SNPshot | rs281875251 |
| SNPdbe | rs281875251 |
| MSV3d | rs281875251 |
| GWAS Ctlg | rs281875251 |
| Max Magnitude | 5 |
aka c.1789G>T (p.Glu597Ter) and also c.1789G>A (p.Glu597Lys); the former is pathogenic in ClinVar for Factor XI deficiency, but the latter is of uncertain significance
note that 23andMe tests the c.1789G>A VUS under the name i6009888
| ClinVar | |
|---|---|
| Risk | rs281875251(A;A) Rs281875251(T;T) |
| Alt | rs281875251(A;A) Rs281875251(T;T) |
| Reference | Rs281875251(G;G) |
| Significance | Probable-Pathogenic |
| Disease | not provided Hereditary factor XI deficiency disease |
| Variation | info |
| Gene | F11 |
| CLNDBN | not provided Hereditary factor XI deficiency disease |
| Reversed | 0 |
| HGVS | NC_000004.11:g.187209679G>A; NC_000004.11:g.187209679G>T |
| CLNSRC | UniProtKB (protein) UniProtKB (variants) |
| CLNACC | RCV000059020.1, RCV000411308.1, |
