rs281875251
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 3 | carrier of factor XI mutation |
(T;T) | 5 | Factor XI deficiency |
Make rs281875251(A;A) |
Make rs281875251(A;G) |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 4 |
Position | 186288525 |
Gene | F11, F11-AS1 |
is a | snp |
is | mentioned by |
dbSNP | rs281875251 |
dbSNP (classic) | rs281875251 |
ClinGen | rs281875251 |
ebi | rs281875251 |
HLI | rs281875251 |
Exac | rs281875251 |
Gnomad | rs281875251 |
Varsome | rs281875251 |
LitVar | rs281875251 |
Map | rs281875251 |
PheGenI | rs281875251 |
Biobank | rs281875251 |
1000 genomes | rs281875251 |
hgdp | rs281875251 |
ensembl | rs281875251 |
geneview | rs281875251 |
scholar | rs281875251 |
rs281875251 | |
pharmgkb | rs281875251 |
gwascentral | rs281875251 |
openSNP | rs281875251 |
23andMe | rs281875251 |
SNPshot | rs281875251 |
SNPdbe | rs281875251 |
MSV3d | rs281875251 |
GWAS Ctlg | rs281875251 |
Max Magnitude | 5 |
aka c.1789G>T (p.Glu597Ter) and also c.1789G>A (p.Glu597Lys); the former is pathogenic in ClinVar for Factor XI deficiency, but the latter is of uncertain significance
note that 23andMe tests the c.1789G>A VUS under the name i6009888
ClinVar | |
---|---|
Risk | rs281875251(A;A) Rs281875251(T;T) |
Alt | rs281875251(A;A) Rs281875251(T;T) |
Reference | Rs281875251(G;G) |
Significance | Probable-Pathogenic |
Disease | not provided Hereditary factor XI deficiency disease |
Variation | info |
Gene | F11 |
CLNDBN | not provided Hereditary factor XI deficiency disease |
Reversed | 0 |
HGVS | NC_000004.11:g.187209679G>A; NC_000004.11:g.187209679G>T |
CLNSRC | UniProtKB (protein) UniProtKB (variants) |
CLNACC | RCV000059020.1, RCV000411308.1, |