rs28359178
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 |
| Make rs28359178(A;A) |
| Make rs28359178(A;G) |
| Reference | GRCh38.p7 38.3/150 |
| Chromosome | MT |
| Position | 13708 |
| Gene | ND5 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs28359178 |
| dbSNP (classic) | rs28359178 |
| ClinGen | rs28359178 |
| ebi | rs28359178 |
| HLI | rs28359178 |
| Exac | rs28359178 |
| Gnomad | rs28359178 |
| Varsome | rs28359178 |
| LitVar | rs28359178 |
| Map | rs28359178 |
| PheGenI | rs28359178 |
| Biobank | rs28359178 |
| 1000 genomes | rs28359178 |
| hgdp | rs28359178 |
| ensembl | rs28359178 |
| geneview | rs28359178 |
| scholar | rs28359178 |
| rs28359178 | |
| pharmgkb | rs28359178 |
| gwascentral | rs28359178 |
| openSNP | rs28359178 |
| 23andMe | rs28359178 |
| SNPshot | rs28359178 |
| SNPdbe | rs28359178 |
| MSV3d | rs28359178 |
| GWAS Ctlg | rs28359178 |
| GMAF | 0.07103 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 19387457] Association of UCP2 -866 G/A polymorphism with chronic inflammatory diseases
| Haplogroup SNP | |
|---|---|
| Alt. Name(s) | G13708A |
| Source(s) | None specified |
| Tree | PhyloTree build 16 |
| Clade Haplogroup |
No Clade Haplogroup |
| Ancestral Haplogroup |
Haplogroup H2a (mtDNA) |
| Derived Haplogroup |
Haplogroup H2a5 (mtDNA) |
| Ancestral Allele | G |
| Derived Allele | A |
| ClinVar | |
|---|---|
| Risk | rs28359178(A;A) |
| Alt | rs28359178(A;A) |
| Reference | Rs28359178(G;G) |
| Significance | Other |
| Disease | Leber's optic atrophy |
| Variation | info |
| Gene | ND5 |
| CLNDBN | Leber's optic atrophy |
| Reversed | 0 |
| HGVS | NC_012920.1:m.13708G>A |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000010336.4, |
