rs28362263
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 1.5 | Modest reduction in LDL-C and coronary risk |
| (A;G) | 1.5 | Modest reduction in LDL-C and coronary risk |
| (G;G) | 0 | common |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 55058182 |
| Gene | PCSK9 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs28362263 |
| dbSNP (classic) | rs28362263 |
| ClinGen | rs28362263 |
| ebi | rs28362263 |
| HLI | rs28362263 |
| Exac | rs28362263 |
| Gnomad | rs28362263 |
| Varsome | rs28362263 |
| LitVar | rs28362263 |
| Map | rs28362263 |
| PheGenI | rs28362263 |
| Biobank | rs28362263 |
| 1000 genomes | rs28362263 |
| hgdp | rs28362263 |
| ensembl | rs28362263 |
| geneview | rs28362263 |
| scholar | rs28362263 |
| rs28362263 | |
| pharmgkb | rs28362263 |
| gwascentral | rs28362263 |
| openSNP | rs28362263 |
| 23andMe | rs28362263 |
| SNPshot | rs28362263 |
| SNPdbe | rs28362263 |
| MSV3d | rs28362263 |
| GWAS Ctlg | rs28362263 |
| GMAF | 0.02158 |
| Max Magnitude | 1.5 |
rs28362263, also known as A443T, is a SNP in the PCSK9 gene.
It has been reported in several studies (including [PMID 16912035] and [PMID 16465619
]) to be a loss-of-function mutation leading to modestly (~3%) lowered LDL-C levels and thereby somewhat reduced risk for coronary events.
[PMID 20031607
] Longitudinal association of PCSK9 sequence variations with low-density lipoprotein cholesterol levels: the Coronary Artery Risk Development in Young Adults Study.
| ClinVar | |
|---|---|
| Risk | Rs28362263(A;A) |
| Alt | Rs28362263(A;A) |
| Reference | Rs28362263(G;G) |
| Significance | Other |
| Disease | not specified Familial hypobetalipoproteinemia Familial hypercholesterolemia Hypercholesterolemia |
| Variation | info |
| Gene | PCSK9 |
| CLNDBN | not specified Familial hypobetalipoproteinemia Familial hypercholesterolemia Hypercholesterolemia, autosomal dominant, 3 |
| Reversed | 0 |
| HGVS | NC_000001.10:g.55523855G>A |
| CLNSRC | |
| CLNACC | RCV000241843.1, RCV000309633.1, RCV000362210.1, RCV000417327.1, |
