rs28897756
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 6 | BRCA2, breast cancer mutation |
(A;G) | 6 | considered a causal BRCA2 mutation for breast cancer |
(G;G) | 0 | normal |
(G;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32379913 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs28897756 |
dbSNP (classic) | rs28897756 |
ClinGen | rs28897756 |
ebi | rs28897756 |
HLI | rs28897756 |
Exac | rs28897756 |
Gnomad | rs28897756 |
Varsome | rs28897756 |
LitVar | rs28897756 |
Map | rs28897756 |
PheGenI | rs28897756 |
Biobank | rs28897756 |
1000 genomes | rs28897756 |
hgdp | rs28897756 |
ensembl | rs28897756 |
geneview | rs28897756 |
scholar | rs28897756 |
rs28897756 | |
pharmgkb | rs28897756 |
gwascentral | rs28897756 |
openSNP | rs28897756 |
23andMe | rs28897756 |
SNPshot | rs28897756 |
SNPdbe | rs28897756 |
MSV3d | rs28897756 |
GWAS Ctlg | rs28897756 |
Max Magnitude | 6 |
rs28897756, also known as 9345G>A, c.9117G>A, p.Pro3039= and P3039P is a SNP in the breast cancer 2 BRCA2 gene.
The rare rs28897756(A) allele has been linked to increased risk for breast cancer in some Dutch families.[PMID 10638982]. It is considered a causal mutation for breast cancer by UMD and is denoted pathogenic in ClinVar.
This variant meets the criteria published in 2013 by the ACMG regarding incidental findings in exome or genome sequencing, as a variant that they do recommend informing a patient about.[PMID 23788249]
Another name used by 23andMe for this SNP is i5010626.
ClinVar | |
---|---|
Risk | Rs28897756(A;A) rs28897756(T;T) |
Alt | Rs28897756(A;A) rs28897756(T;T) |
Reference | Rs28897756(G;G) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32954050G>A; NC_000013.10:g.32954050G>T |
CLNSRC | Ambry Genetics ClinVar |
CLNACC | RCV000031798.6, RCV000045725.6, RCV000074560.7, RCV000131039.3, RCV000258500.1, |