rs28938174
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;T) | 3 | Unaffected carrier of a Smith-Lemli-Opitz syndrome mutation |
| Make rs28938174(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 71442319 |
| Gene | DHCR7 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs28938174 |
| dbSNP (classic) | rs28938174 |
| ClinGen | rs28938174 |
| ebi | rs28938174 |
| HLI | rs28938174 |
| Exac | rs28938174 |
| Gnomad | rs28938174 |
| Varsome | rs28938174 |
| LitVar | rs28938174 |
| Map | rs28938174 |
| PheGenI | rs28938174 |
| Biobank | rs28938174 |
| 1000 genomes | rs28938174 |
| hgdp | rs28938174 |
| ensembl | rs28938174 |
| geneview | rs28938174 |
| scholar | rs28938174 |
| rs28938174 | |
| pharmgkb | rs28938174 |
| gwascentral | rs28938174 |
| openSNP | rs28938174 |
| 23andMe | rs28938174 |
| SNPshot | rs28938174 |
| SNPdbe | rs28938174 |
| MSV3d | rs28938174 |
| GWAS Ctlg | rs28938174 |
| Max Magnitude | 3 |
aka c.356A>T (p.His119Leu or H119L); note that c.356A>G (p.His119Arg) is also a known variant for rs28938174, however, it's significance is uncertain (whereas c.356A>T is pathogenic for SLO)
| ClinVar | |
|---|---|
| Risk | rs28938174(G;G) rs28938174(T;T) |
| Alt | rs28938174(G;G) rs28938174(T;T) |
| Reference | Rs28938174(A;A) |
| Significance | Pathogenic |
| Disease | Smith-Lemli-Opitz syndrome not provided |
| Variation | info |
| Gene | DHCR7 |
| CLNDBN | Smith-Lemli-Opitz syndrome not provided |
| Reversed | 1 |
| HGVS | NC_000011.9:g.71153365T>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000007182.6, RCV000274996.1, |
