rs28940870
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 4 | type II hereditary angioedema |
| (A;C) | 4.1 | Hereditary angioedema, type II |
| (C;C) | 0 | normal |
| (C;T) | 4.1 | Hereditary angioedema |
| (T;T) | 4 | type II hereditary angioedema |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 57614474 |
| Gene | SERPING1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs28940870 |
| dbSNP (classic) | rs28940870 |
| ClinGen | rs28940870 |
| ebi | rs28940870 |
| HLI | rs28940870 |
| Exac | rs28940870 |
| Gnomad | rs28940870 |
| Varsome | rs28940870 |
| LitVar | rs28940870 |
| Map | rs28940870 |
| PheGenI | rs28940870 |
| Biobank | rs28940870 |
| 1000 genomes | rs28940870 |
| hgdp | rs28940870 |
| ensembl | rs28940870 |
| geneview | rs28940870 |
| scholar | rs28940870 |
| rs28940870 | |
| pharmgkb | rs28940870 |
| gwascentral | rs28940870 |
| openSNP | rs28940870 |
| 23andMe | rs28940870 |
| SNPshot | rs28940870 |
| SNPdbe | rs28940870 |
| MSV3d | rs28940870 |
| GWAS Ctlg | rs28940870 |
| Max Magnitude | 4.1 |
rs28940870 represents two dominant (though rare) mutations in the SERPING1 gene, resulting in type II hereditary angioedema. [PMID 3178731
]
rs28940870(A) is also known as c.1396C>A, p.Arg466Ser, R466S, Arg444Ser and R444S; rs28940870(T) is also known as c.1396C>T, p.Arg466Cys, R466C, Arg444Cys and R444C.
23andMe name for c.1396C>A: i6018367
| ClinVar | |
|---|---|
| Risk | Rs28940870(A;A) Rs28940870(T;T) |
| Alt | Rs28940870(A;A) Rs28940870(T;T) |
| Reference | Rs28940870(C;C) |
| Significance | Pathogenic |
| Disease | Hereditary C1 esterase inhibitor deficiency - dysfunctional factor not provided |
| Variation | info |
| Gene | SERPING1 |
| CLNDBN | Hereditary C1 esterase inhibitor deficiency - dysfunctional factor not provided |
| Reversed | 0 |
| HGVS | NC_000011.9:g.57381947C>A; NC_000011.9:g.57381947C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) UniProtKB (variants) |
| CLNACC | RCV000004154.2, RCV000059083.1, RCV000004153.2, RCV000059084.1, |
[PMID 22994404] Mutational spectrum and geno-phenotype correlation in Chinese families with hereditary angioedema.
