rs3087879

plus

Geno	Mag	Summary
(G;G)	0	common in clinvar

Make rs3087879(C;C)

Make rs3087879(C;G)

Reference

GRCh38 38.1/141

Chromosome

9

Position

4586808

Gene	SLC1A1, SPATA6L

is a	snp
is	mentioned by
dbSNP	rs3087879
dbSNP (classic)	rs3087879
ClinGen	rs3087879
ebi	rs3087879
HLI	rs3087879
Exac	rs3087879
Gnomad	rs3087879
Varsome	rs3087879
LitVar	rs3087879
Map	rs3087879
PheGenI	rs3087879
Biobank	rs3087879
1000 genomes	rs3087879
hgdp	rs3087879
ensembl	rs3087879
geneview	rs3087879
scholar	rs3087879
google	rs3087879
pharmgkb	rs3087879
gwascentral	rs3087879
openSNP	rs3087879
23andMe	rs3087879
SNPshot	rs3087879
SNPdbe	rs3087879
MSV3d	rs3087879
GWAS Ctlg	rs3087879

GMAF

0.2374

Max Magnitude

0

?

(C;C) (C;G) (G;G)

28

[PMID 19349310 ] A haplotype containing quantitative trait loci for SLC1A1 gene expression and its association with obsessive-compulsive disorder

[PMID 22665263] Molecular genetics of obsessive-compulsive disorder: a comprehensive meta-analysis of genetic association studies

[PMID 19324536 ] Glutamate receptor gene (GRIN2B) associated with reduced anterior cingulate glutamatergic concentration in pediatric obsessive-compulsive disorder.

[PMID 22776887] Interaction of SLC1A1 gene variants and life stress on pharmacological resistance in obsessive-compulsive disorder.

[PMID 26254621] Association between genetic variants related to glutamatergic, dopaminergic and neurodevelopment pathways and white matter microstructure in child and adolescent patients with obsessive-compulsive disorder

ClinVar
Risk	rs3087879(C;C)
Alt	rs3087879(C;C)
Reference	Rs3087879(G;G)
Significance	Non-pathogenic
Disease	Dicarboxylic aminoaciduria
Variation	info
Gene	SPATA6L SLC1A1
CLNDBN	Dicarboxylic aminoaciduria
Reversed	0
HGVS	NC_000009.11:g.4586808G>C
CLNSRC
CLNACC	RCV000273817.1,