rs3130
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(T;T) | 0 | common in clinvar |
Make rs3130(C;C) |
Make rs3130(C;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 4 |
Position | 15968315 |
Gene | PROM1 |
is a | snp |
is | mentioned by |
dbSNP | rs3130 |
dbSNP (classic) | rs3130 |
ClinGen | rs3130 |
ebi | rs3130 |
HLI | rs3130 |
Exac | rs3130 |
Gnomad | rs3130 |
Varsome | rs3130 |
LitVar | rs3130 |
Map | rs3130 |
PheGenI | rs3130 |
Biobank | rs3130 |
1000 genomes | rs3130 |
hgdp | rs3130 |
ensembl | rs3130 |
geneview | rs3130 |
scholar | rs3130 |
rs3130 | |
pharmgkb | rs3130 |
gwascentral | rs3130 |
openSNP | rs3130 |
23andMe | rs3130 |
SNPshot | rs3130 |
SNPdbe | rs3130 |
MSV3d | rs3130 |
GWAS Ctlg | rs3130 |
GMAF | 0.4399 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
[PMID 24302553] Polymorphisms at the microRNA binding-site of the stem cell marker gene CD133 modify susceptibility to and survival of gastric cancer
[PMID 26406410] Association of CD133 polymorphisms and response to bevacizumab in patients with metastatic colorectal cancer
[PMID 27130457] Polymorphisms of the Stem Cell Marker Gene CD133 and the Risk of Lung Cancer in Chinese Population.
ClinVar | |
---|---|
Risk | rs3130(C;C) |
Alt | rs3130(C;C) |
Reference | Rs3130(T;T) |
Significance | Non-pathogenic |
Disease | Stargardt Disease Retinitis Pigmentosa Cone-Rod Dystrophy Retinal Macular Dystrophy |
Variation | info |
Gene | PROM1 |
CLNDBN | Stargardt Disease, Dominant Retinitis Pigmentosa, Recessive Cone-Rod Dystrophy, Dominant Retinal Macular Dystrophy |
Reversed | 0 |
HGVS | NC_000004.11:g.15969938T>C |
CLNSRC | |
CLNACC | RCV000279953.1, RCV000337375.1, RCV000343278.1, RCV000399307.1, |
[PMID 28827262] Polymorphisms of the stem cell marker gene CD133 are associated the clinical outcome in a cohort of Chinese non-small cell lung cancer patients.