rs3130
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 | common in clinvar |
| Make rs3130(C;C) |
| Make rs3130(C;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 15968315 |
| Gene | PROM1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3130 |
| dbSNP (classic) | rs3130 |
| ClinGen | rs3130 |
| ebi | rs3130 |
| HLI | rs3130 |
| Exac | rs3130 |
| Gnomad | rs3130 |
| Varsome | rs3130 |
| LitVar | rs3130 |
| Map | rs3130 |
| PheGenI | rs3130 |
| Biobank | rs3130 |
| 1000 genomes | rs3130 |
| hgdp | rs3130 |
| ensembl | rs3130 |
| geneview | rs3130 |
| scholar | rs3130 |
| rs3130 | |
| pharmgkb | rs3130 |
| gwascentral | rs3130 |
| openSNP | rs3130 |
| 23andMe | rs3130 |
| SNPshot | rs3130 |
| SNPdbe | rs3130 |
| MSV3d | rs3130 |
| GWAS Ctlg | rs3130 |
| GMAF | 0.4399 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 24302553] Polymorphisms at the microRNA binding-site of the stem cell marker gene CD133 modify susceptibility to and survival of gastric cancer
[PMID 26406410] Association of CD133 polymorphisms and response to bevacizumab in patients with metastatic colorectal cancer
[PMID 27130457] Polymorphisms of the Stem Cell Marker Gene CD133 and the Risk of Lung Cancer in Chinese Population.
| ClinVar | |
|---|---|
| Risk | rs3130(C;C) |
| Alt | rs3130(C;C) |
| Reference | Rs3130(T;T) |
| Significance | Non-pathogenic |
| Disease | Stargardt Disease Retinitis Pigmentosa Cone-Rod Dystrophy Retinal Macular Dystrophy |
| Variation | info |
| Gene | PROM1 |
| CLNDBN | Stargardt Disease, Dominant Retinitis Pigmentosa, Recessive Cone-Rod Dystrophy, Dominant Retinal Macular Dystrophy |
| Reversed | 0 |
| HGVS | NC_000004.11:g.15969938T>C |
| CLNSRC | |
| CLNACC | RCV000279953.1, RCV000337375.1, RCV000343278.1, RCV000399307.1, |
[PMID 28827262
] Polymorphisms of the stem cell marker gene CD133 are associated the clinical outcome in a cohort of Chinese non-small cell lung cancer patients.
