rs35264875
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (T;T) | 3 | blonde hair color |
| Make rs35264875(A;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 69078931 |
| Gene | TPCN2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs35264875 |
| dbSNP (classic) | rs35264875 |
| ClinGen | rs35264875 |
| ebi | rs35264875 |
| HLI | rs35264875 |
| Exac | rs35264875 |
| Gnomad | rs35264875 |
| Varsome | rs35264875 |
| LitVar | rs35264875 |
| Map | rs35264875 |
| PheGenI | rs35264875 |
| Biobank | rs35264875 |
| 1000 genomes | rs35264875 |
| hgdp | rs35264875 |
| ensembl | rs35264875 |
| geneview | rs35264875 |
| scholar | rs35264875 |
| rs35264875 | |
| pharmgkb | rs35264875 |
| gwascentral | rs35264875 |
| openSNP | rs35264875 |
| 23andMe | rs35264875 |
| SNPshot | rs35264875 |
| SNPdbe | rs35264875 |
| MSV3d | rs35264875 |
| GWAS Ctlg | rs35264875 |
| GMAF | 0.1015 |
| Max Magnitude | 3 |
| GWAS | |
|---|---|
| SNP | rs35264875 |
| PubMedID | [PMID 18488028] |
| Condition | Blond vs. brown hair |
| Gene | TPCN2 |
| Risk Allele | T |
| pValue | 4.00E-030 |
| OR | 2.49 |
| 95% CI | 1.96-3.15 |
blonde hair color
| ? | (A;A) (A;T) (T;T) | |
|---|---|---|
|
| ||
| ClinVar | |
|---|---|
| Risk | rs35264875(C;C) Rs35264875(T;T) |
| Alt | rs35264875(C;C) Rs35264875(T;T) |
| Reference | Rs35264875(A;A) |
| Significance | Other |
| Disease | Skin/hair/eye pigmentation |
| Variation | info |
| Gene | TPCN2 |
| CLNDBN | Skin/hair/eye pigmentation, variation in, 10 |
| Reversed | 0 |
| HGVS | NC_000011.9:g.68846399A>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000000763.2, |
[PMID 26918892
] Genetic Variants of TPCN2 Associated with Type 2 Diabetes Risk in the Chinese Population.
