rs387906686
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| (C;T) | 6 | Early infantile epileptic encephalopathy and also benign infantile spasms |
| Make rs387906686(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 165310413 |
| Gene | SCN2A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs387906686 |
| dbSNP (classic) | rs387906686 |
| ClinGen | rs387906686 |
| ebi | rs387906686 |
| HLI | rs387906686 |
| Exac | rs387906686 |
| Gnomad | rs387906686 |
| Varsome | rs387906686 |
| LitVar | rs387906686 |
| Map | rs387906686 |
| PheGenI | rs387906686 |
| Biobank | rs387906686 |
| 1000 genomes | rs387906686 |
| hgdp | rs387906686 |
| ensembl | rs387906686 |
| geneview | rs387906686 |
| scholar | rs387906686 |
| rs387906686 | |
| pharmgkb | rs387906686 |
| gwascentral | rs387906686 |
| openSNP | rs387906686 |
| 23andMe | rs387906686 |
| SNPshot | rs387906686 |
| SNPdbe | rs387906686 |
| MSV3d | rs387906686 |
| GWAS Ctlg | rs387906686 |
| Max Magnitude | 6 |
rs387906686, also known as c.788C>T, p.Ala263Val and A263V, represents a rare variant in the SCN2A gene on chromosome 2.
The rs387906686(T) allele is reported by multiple sources in ClinVar to be associated with both benign familial neonatal-infantile seizures (BFNIS) and early infantile epileptic encephalopathy, type 11.
| ClinVar | |
|---|---|
| Risk | rs387906686(T;T) |
| Alt | rs387906686(T;T) |
| Reference | Rs387906686(C;C) |
| Significance | Pathogenic |
| Disease | Early infantile epileptic encephalopathy 11 Benign familial neonatal-infantile seizures not provided Epileptic encephalopathy |
| Variation | info |
| Gene | SCN2A |
| CLNDBN | Early infantile epileptic encephalopathy 11 Benign familial neonatal-infantile seizures not provided Epileptic encephalopathy |
| Reversed | 0 |
| HGVS | NC_000002.11:g.166166923C>T |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000022769.25, RCV000118251.1, RCV000189193.2, RCV000416960.1, |
