rs397515360
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 5 | Achromatopsia |
(-;C) | 3 | Carrier of an achromatopsia mutation |
(C;C) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 8 |
Position | 86643781 |
Gene | CNGB3 |
is a | snp |
is | mentioned by |
dbSNP | rs397515360 |
dbSNP (classic) | rs397515360 |
ClinGen | rs397515360 |
ebi | rs397515360 |
HLI | rs397515360 |
Exac | rs397515360 |
Gnomad | rs397515360 |
Varsome | rs397515360 |
LitVar | rs397515360 |
Map | rs397515360 |
PheGenI | rs397515360 |
Biobank | rs397515360 |
1000 genomes | rs397515360 |
hgdp | rs397515360 |
ensembl | rs397515360 |
geneview | rs397515360 |
scholar | rs397515360 |
rs397515360 | |
pharmgkb | rs397515360 |
gwascentral | rs397515360 |
openSNP | rs397515360 |
23andMe | rs397515360 |
SNPshot | rs397515360 |
SNPdbe | rs397515360 |
MSV3d | rs397515360 |
GWAS Ctlg | rs397515360 |
Max Magnitude | 5 |
rs397515360, also known as c.1148delC or p.Thr383IlefsX13, represents a rare mutation in the CNGB3 gene on chromosome 8.
Inherited recessively, the rs397515360(-) deletion allele is considered in ClinVar (and BabySeq) to be pathogenic for achromatopsia.
23andMe name: i5012559
ClinVar | |
---|---|
Risk | Rs397515360(-;-) |
Alt | Rs397515360(-;-) |
Reference | Rs397515360(C;C) |
Significance | Pathogenic |
Disease | Achromatopsia 3 Stargardt disease 1 not provided Stargardt Disease Achromatopsia |
Variation | info |
Gene | CNGB3 |
CLNDBN | Achromatopsia 3 Stargardt disease 1 not provided Stargardt Disease, Recessive Achromatopsia |
Reversed | 1 |
HGVS | NC_000008.10:g.87656009delG |
CLNSRC | HGMD OMIM Allelic Variant |
CLNACC | RCV000005535.3, RCV000005536.2, RCV000081978.4, RCV000273066.1, RCV000328174.1, |