rs398123109
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 7.7 | X-linked adrenoleukodystrophy; symptoms and age of onset highly variable |
(-;CGGGGGAACACGCTGA) | 4.4 | Carrier of of X-linked adrenoleukodystrophy mutation; AMN symptoms possible |
(CGGGGGAACACGCTGA;CGGGGGAACACGCTGA) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | X |
Position | 153725297 |
Gene | ABCD1, BCAP31 |
is a | snp |
is | mentioned by |
dbSNP | rs398123109 |
dbSNP (classic) | rs398123109 |
ClinGen | rs398123109 |
ebi | rs398123109 |
HLI | rs398123109 |
Exac | rs398123109 |
Gnomad | rs398123109 |
Varsome | rs398123109 |
LitVar | rs398123109 |
Map | rs398123109 |
PheGenI | rs398123109 |
Biobank | rs398123109 |
1000 genomes | rs398123109 |
hgdp | rs398123109 |
ensembl | rs398123109 |
geneview | rs398123109 |
scholar | rs398123109 |
rs398123109 | |
pharmgkb | rs398123109 |
gwascentral | rs398123109 |
openSNP | rs398123109 |
23andMe | rs398123109 |
SNPshot | rs398123109 |
SNPdbe | rs398123109 |
MSV3d | rs398123109 |
GWAS Ctlg | rs398123109 |
Max Magnitude | 7.7 |
aka c.31_46del16 (p.Arg11Serfs)
Reported in ClinVar as pathogenic for adrenoleukodystrophy (ALD)
ClinVar | |
---|---|
Risk | Rs398123109(-;-) |
Alt | Rs398123109(-;-) |
Reference | Rs398123109(CGGGGGAACACGCTGA;CGGGGGAACACGCTGA) |
Significance | Pathogenic |
Disease | Adrenoleukodystrophy |
Variation | info |
Gene | BCAP31 ABCD1 |
CLNDBN | Adrenoleukodystrophy |
Reversed | 0 |
HGVS | NC_000023.10:g.152990752_152990767del16 |
CLNSRC | ClinVar |
CLNACC | RCV000077962.4, |