rs398124502
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;-) | 6 | Polycystic Kidney disease |
| (-;A) | 3 | carrier of an autosomal recessive polycystic kidney disease mutation |
| (A;A) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 51747927 |
| Gene | PKHD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs398124502 |
| dbSNP (classic) | rs398124502 |
| ClinGen | rs398124502 |
| ebi | rs398124502 |
| HLI | rs398124502 |
| Exac | rs398124502 |
| Gnomad | rs398124502 |
| Varsome | rs398124502 |
| LitVar | rs398124502 |
| Map | rs398124502 |
| PheGenI | rs398124502 |
| Biobank | rs398124502 |
| 1000 genomes | rs398124502 |
| hgdp | rs398124502 |
| ensembl | rs398124502 |
| geneview | rs398124502 |
| scholar | rs398124502 |
| rs398124502 | |
| pharmgkb | rs398124502 |
| gwascentral | rs398124502 |
| openSNP | rs398124502 |
| 23andMe | rs398124502 |
| SNPshot | rs398124502 |
| SNPdbe | rs398124502 |
| MSV3d | rs398124502 |
| GWAS Ctlg | rs398124502 |
| Max Magnitude | 6 |
rs398124502, also known as c. 9689del A. or p.Asp3230fs, is a SNP in the PKHD1 gene on chromosome 6.
The risk allele, rs398124502(-), is considered causative for autosomal recessive polycystic kidney disease.
This SNP is most likely referred to as i5012610 by 23andMe.
| ClinVar | |
|---|---|
| Risk | Rs398124502(-;-) |
| Alt | Rs398124502(-;-) |
| Reference | Rs398124502(A;A) |
| Significance | Pathogenic |
| Disease | not provided Autosomal recessive polycystic kidney disease |
| Variation | info |
| Gene | PKHD1 |
| CLNDBN | not provided Autosomal recessive polycystic kidney disease |
| Reversed | 1 |
| HGVS | NC_000006.11:g.51612725delT |
| CLNSRC | HGMD |
| CLNACC | RCV000082594.3, RCV000179217.2, |
