rs398124502
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 6 | Polycystic Kidney disease |
(-;A) | 3 | carrier of an autosomal recessive polycystic kidney disease mutation |
(A;A) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 51747927 |
Gene | PKHD1 |
is a | snp |
is | mentioned by |
dbSNP | rs398124502 |
dbSNP (classic) | rs398124502 |
ClinGen | rs398124502 |
ebi | rs398124502 |
HLI | rs398124502 |
Exac | rs398124502 |
Gnomad | rs398124502 |
Varsome | rs398124502 |
LitVar | rs398124502 |
Map | rs398124502 |
PheGenI | rs398124502 |
Biobank | rs398124502 |
1000 genomes | rs398124502 |
hgdp | rs398124502 |
ensembl | rs398124502 |
geneview | rs398124502 |
scholar | rs398124502 |
rs398124502 | |
pharmgkb | rs398124502 |
gwascentral | rs398124502 |
openSNP | rs398124502 |
23andMe | rs398124502 |
SNPshot | rs398124502 |
SNPdbe | rs398124502 |
MSV3d | rs398124502 |
GWAS Ctlg | rs398124502 |
Max Magnitude | 6 |
rs398124502, also known as c. 9689del A. or p.Asp3230fs, is a SNP in the PKHD1 gene on chromosome 6.
The risk allele, rs398124502(-), is considered causative for autosomal recessive polycystic kidney disease.
This SNP is most likely referred to as i5012610 by 23andMe.
ClinVar | |
---|---|
Risk | Rs398124502(-;-) |
Alt | Rs398124502(-;-) |
Reference | Rs398124502(A;A) |
Significance | Pathogenic |
Disease | not provided Autosomal recessive polycystic kidney disease |
Variation | info |
Gene | PKHD1 |
CLNDBN | not provided Autosomal recessive polycystic kidney disease |
Reversed | 1 |
HGVS | NC_000006.11:g.51612725delT |
CLNSRC | HGMD |
CLNACC | RCV000082594.3, RCV000179217.2, |