rs42490
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs42490(A;A) |
| Make rs42490(A;G) |
| Make rs42490(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 8 |
| Position | 89766285 |
| Gene | RIPK2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs42490 |
| dbSNP (classic) | rs42490 |
| ClinGen | rs42490 |
| ebi | rs42490 |
| HLI | rs42490 |
| Exac | rs42490 |
| Gnomad | rs42490 |
| Varsome | rs42490 |
| LitVar | rs42490 |
| Map | rs42490 |
| PheGenI | rs42490 |
| Biobank | rs42490 |
| 1000 genomes | rs42490 |
| hgdp | rs42490 |
| ensembl | rs42490 |
| geneview | rs42490 |
| scholar | rs42490 |
| rs42490 | |
| pharmgkb | rs42490 |
| gwascentral | rs42490 |
| openSNP | rs42490 |
| 23andMe | rs42490 |
| SNPshot | rs42490 |
| SNPdbe | rs42490 |
| MSV3d | rs42490 |
| GWAS Ctlg | rs42490 |
| GMAF | 0.4343 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
Variant in the RIPK2 gene associated with a reduced risk of leprosy in Asians, according to the 23andMe blog. The protective allele is A, and the odds ratio is 0.76.
| GWAS snp | |
|---|---|
| PMID | [PMID 20018961] |
| Trait | Leprosy |
| Title | Genomewide Association Study of Leprosy |
| Risk Allele | G |
| P-val | 1E-16 |
| Odds Ratio | 1.32 [1.23-1.41] |
[PMID 22504414] Association between C13ORF31, NOD2, RIPK2 and TLR10 polymorphisms and urothelial bladder cancer.
