rs429608
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs429608(A;A) |
| Make rs429608(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 31962685 |
| Gene | SKIV2L |
| is a | snp |
| is | mentioned by |
| dbSNP | rs429608 |
| dbSNP (classic) | rs429608 |
| ClinGen | rs429608 |
| ebi | rs429608 |
| HLI | rs429608 |
| Exac | rs429608 |
| Gnomad | rs429608 |
| Varsome | rs429608 |
| LitVar | rs429608 |
| Map | rs429608 |
| PheGenI | rs429608 |
| Biobank | rs429608 |
| 1000 genomes | rs429608 |
| hgdp | rs429608 |
| ensembl | rs429608 |
| geneview | rs429608 |
| scholar | rs429608 |
| rs429608 | |
| pharmgkb | rs429608 |
| gwascentral | rs429608 |
| openSNP | rs429608 |
| 23andMe | rs429608 |
| SNPshot | rs429608 |
| SNPdbe | rs429608 |
| MSV3d | rs429608 |
| GWAS Ctlg | rs429608 |
| GMAF | 0.1387 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20385819 |
| Trait | Age-related macular degeneration |
| Title | Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration |
| Risk Allele | G |
| P-val | 3E-21 |
| Odds Ratio | 2.16 [1.84-2.53] |
| GWAS snp | |
|---|---|
| PMID | [PMID 20861866 |
| Trait | |
| Title | Genome-wide association identifies SKIV2L and MYRIP as protective factors for age-related macular degeneration |
| Risk Allele | |
| P-val | 5E-15 |
| Odds Ratio | 1.85 [NR] |
[PMID 23557739] A genetic variant in the SKIV2L gene is significantly associated with age-related macular degeneration in a Han Chinese population
| GWAS snp | |
|---|---|
| PMID | [PMID 23455636 |
| Trait | Age-related macular degeneration |
| Title | Seven new loci associated with age-related macular degeneration. |
| Risk Allele | G |
| P-val | 4E-89 |
| Odds Ratio | 1.74 [1.68-1.79] |
[PMID 24865191] Genetic Variants in the SKIV2L Gene in Exudative Age-related Macular Degeneration in the Japanese Population
| ClinVar | |
|---|---|
| Risk | rs429608(A;A) |
| Alt | rs429608(A;A) |
| Reference | Rs429608(G;G) |
| Significance | Untested |
| Disease | not provided |
| Variation | info |
| Gene | SKIV2L |
| CLNDBN | not provided |
| Reversed | 0 |
| HGVS | NC_000006.11:g.31930462G>A |
| CLNSRC | |
| CLNACC | RCV000190303.1, |
[PMID 27484132] Association between SKIV2L polymorphism rs429608 and age-related macular degeneration: A meta-analysis.
