rs45517214
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 4 | Tuberous sclerosis |
| (G;T) | 6.3 | Tuberous Sclerosis Complex |
| (T;T) | 0 | common in clinvar |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 2072293 |
| Gene | TSC2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs45517214 |
| dbSNP (classic) | rs45517214 |
| ClinGen | rs45517214 |
| ebi | rs45517214 |
| HLI | rs45517214 |
| Exac | rs45517214 |
| Gnomad | rs45517214 |
| Varsome | rs45517214 |
| LitVar | rs45517214 |
| Map | rs45517214 |
| PheGenI | rs45517214 |
| Biobank | rs45517214 |
| 1000 genomes | rs45517214 |
| hgdp | rs45517214 |
| ensembl | rs45517214 |
| geneview | rs45517214 |
| scholar | rs45517214 |
| rs45517214 | |
| pharmgkb | rs45517214 |
| gwascentral | rs45517214 |
| openSNP | rs45517214 |
| 23andMe | rs45517214 |
| SNPshot | rs45517214 |
| SNPdbe | rs45517214 |
| MSV3d | rs45517214 |
| GWAS Ctlg | rs45517214 |
| Max Magnitude | 6.3 |
rs45517214 is a SNP in the TSC2 gene on chromosome 16, associated with tuberous sclerosis in an autosomal dominant manner.[PMID 10069705]
This variant meets the criteria published in 2013 by the ACMG regarding incidental findings in exome or genome sequencing, as a variant that they do recommend informing a patient about.[PMID 23788249
]
See also OMIM 191092.0007
| ClinVar | |
|---|---|
| Risk | Rs45517214(G;G) |
| Alt | Rs45517214(G;G) |
| Reference | Rs45517214(T;T) |
| Significance | Pathogenic |
| Disease | Tuberous sclerosis 2 Tuberous sclerosis syndrome |
| Variation | info |
| Gene | TSC2 |
| CLNDBN | Tuberous sclerosis 2 Tuberous sclerosis syndrome |
| Reversed | 0 |
| HGVS | NC_000016.9:g.2122294T>G |
| CLNSRC | OMIM Allelic Variant Tuberous sclerosis database (TSC2) UniProtKB (protein) |
| CLNACC | RCV000013207.25, RCV000042452.2, |
[PMID 10069705] Novel TSC2 mutation in a patient with pulmonary tuberous sclerosis: lack of loss of heterozygosity in a lung cyst.
[PMID 10570911] Mutational analysis of TSC1 and TSC2 genes in Japanese patients with tuberous sclerosis complex.
