rs4962416
| Orientation | plus |
| Stabilized | plus |
| Make rs4962416(C;C) |
| Make rs4962416(C;T) |
| Make rs4962416(T;T) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 10 |
| Position | 125008303 |
| Gene | CTBP2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs4962416 |
| dbSNP (classic) | rs4962416 |
| ClinGen | rs4962416 |
| ebi | rs4962416 |
| HLI | rs4962416 |
| Exac | rs4962416 |
| Gnomad | rs4962416 |
| Varsome | rs4962416 |
| LitVar | rs4962416 |
| Map | rs4962416 |
| PheGenI | rs4962416 |
| Biobank | rs4962416 |
| 1000 genomes | rs4962416 |
| hgdp | rs4962416 |
| ensembl | rs4962416 |
| geneview | rs4962416 |
| scholar | rs4962416 |
| rs4962416 | |
| pharmgkb | rs4962416 |
| gwascentral | rs4962416 |
| openSNP | rs4962416 |
| 23andMe | rs4962416 |
| SNPshot | rs4962416 |
| SNPdbe | rs4962416 |
| MSV3d | rs4962416 |
| GWAS Ctlg | rs4962416 |
| GMAF | 0.1662 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS | |
|---|---|
| SNP | rs4962416 |
| PubMedID | [PMID 18264096] |
| Condition | Prostate cancer (aggressive) |
| Gene | CTBP2 |
| Risk Allele | C |
| pValue | 2.00E-007 |
| OR | 1.17 |
| 95% CI | 1.05-1.30 |
[PMID 22459122
] Interactions Between Genome-wide Significant Genetic Variants and Circulating Concentrations of Insulin-like Growth Factor 1, Sex Hormones, and Binding Proteins in Relation to Prostate Cancer Risk in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium
[PMID 18794092] Association of prostate cancer risk variants with clinicopathologic characteristics of the disease.
[PMID 18974127] Association study of prostate cancer susceptibility variants with risks of invasive ovarian, breast, and colorectal cancer.
[PMID 19104501] Prostate cancer genomics: towards a new understanding.
[PMID 19318432] Generalizability of associations from prostate cancer genome-wide association studies in multiple populations.
[PMID 19366831] Analysis of recently identified prostate cancer susceptibility loci in a population-based study: associations with family history and clinical features.
[PMID 19434657] Individual and cumulative effect of prostate cancer risk-associated variants on clinicopathologic variables in 5,895 prostate cancer patients.
[PMID 19549807] Prostate cancer risk associated loci in African Americans.
[PMID 20039378] Estimation of genotype relative risks from pedigree data by retrospective likelihoods.
[PMID 20569440] Alterations in LMTK2, MSMB and HNF1B gene expression are associated with the development of prostate cancer.
[PMID 20690139] Meta-analysis of genome-wide and replication association studies on prostate cancer.
[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.
[PMID 21538423] Early onset prostate cancer has a significant genetic component.
