rs539793378
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in clinvar |
| (G;T) | 5 | Polycystic Kidney Disease (predicted) |
| Make rs539793378(T;T) |
| Reference | GRCh38.p7 38.3/150 |
| Chromosome | 16 |
| Position | 2108868 |
| Gene | PKD1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs539793378 |
| dbSNP (classic) | rs539793378 |
| ClinGen | rs539793378 |
| ebi | rs539793378 |
| HLI | rs539793378 |
| Exac | rs539793378 |
| Gnomad | rs539793378 |
| Varsome | rs539793378 |
| LitVar | rs539793378 |
| Map | rs539793378 |
| PheGenI | rs539793378 |
| Biobank | rs539793378 |
| 1000 genomes | rs539793378 |
| hgdp | rs539793378 |
| ensembl | rs539793378 |
| geneview | rs539793378 |
| scholar | rs539793378 |
| rs539793378 | |
| pharmgkb | rs539793378 |
| gwascentral | rs539793378 |
| openSNP | rs539793378 |
| 23andMe | rs539793378 |
| SNPshot | rs539793378 |
| SNPdbe | rs539793378 |
| MSV3d | rs539793378 |
| GWAS Ctlg | rs539793378 |
| Max Magnitude | 5 |
c.6299C>A (p.Ser2100Ter)
Listed in ClinVar as pathogenic for autosomal dominant polycystic kidney disease
| ClinVar | |
|---|---|
| Risk | rs539793378(A;A) rs539793378(T;T) |
| Alt | rs539793378(A;A) rs539793378(T;T) |
| Reference | Rs539793378(G;G) |
| Significance | Pathogenic |
| Disease | Polycystic kidney disease |
| Variation | info |
| Gene | PKD1 |
| CLNDBN | Polycystic kidney disease, adult type |
| Reversed | 0 |
| HGVS | NC_000016.9:g.2158869G>T |
| CLNSRC | |
| CLNACC | RCV000449590.1, |
