rs539793378
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 5 | Polycystic Kidney Disease (predicted) |
Make rs539793378(T;T) |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 16 |
Position | 2108868 |
Gene | PKD1 |
is a | snp |
is | mentioned by |
dbSNP | rs539793378 |
dbSNP (classic) | rs539793378 |
ClinGen | rs539793378 |
ebi | rs539793378 |
HLI | rs539793378 |
Exac | rs539793378 |
Gnomad | rs539793378 |
Varsome | rs539793378 |
LitVar | rs539793378 |
Map | rs539793378 |
PheGenI | rs539793378 |
Biobank | rs539793378 |
1000 genomes | rs539793378 |
hgdp | rs539793378 |
ensembl | rs539793378 |
geneview | rs539793378 |
scholar | rs539793378 |
rs539793378 | |
pharmgkb | rs539793378 |
gwascentral | rs539793378 |
openSNP | rs539793378 |
23andMe | rs539793378 |
SNPshot | rs539793378 |
SNPdbe | rs539793378 |
MSV3d | rs539793378 |
GWAS Ctlg | rs539793378 |
Max Magnitude | 5 |
c.6299C>A (p.Ser2100Ter)
Listed in ClinVar as pathogenic for autosomal dominant polycystic kidney disease
ClinVar | |
---|---|
Risk | rs539793378(A;A) rs539793378(T;T) |
Alt | rs539793378(A;A) rs539793378(T;T) |
Reference | Rs539793378(G;G) |
Significance | Pathogenic |
Disease | Polycystic kidney disease |
Variation | info |
Gene | PKD1 |
CLNDBN | Polycystic kidney disease, adult type |
Reversed | 0 |
HGVS | NC_000016.9:g.2158869G>T |
CLNSRC | |
CLNACC | RCV000449590.1, |