rs574552037
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;G) | 6 | Increased cancer risk; ovarian cancer & related |
(G;G) | 0 | common in clinvar |
Make rs574552037(A;A) |
Make rs574552037(A;G) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 61716043 |
Gene | BRIP1 |
is a | snp |
is | mentioned by |
dbSNP | rs574552037 |
dbSNP (classic) | rs574552037 |
ClinGen | rs574552037 |
ebi | rs574552037 |
HLI | rs574552037 |
Exac | rs574552037 |
Gnomad | rs574552037 |
Varsome | rs574552037 |
LitVar | rs574552037 |
Map | rs574552037 |
PheGenI | rs574552037 |
Biobank | rs574552037 |
1000 genomes | rs574552037 |
hgdp | rs574552037 |
ensembl | rs574552037 |
geneview | rs574552037 |
scholar | rs574552037 |
rs574552037 | |
pharmgkb | rs574552037 |
gwascentral | rs574552037 |
openSNP | rs574552037 |
23andMe | rs574552037 |
SNPshot | rs574552037 |
SNPdbe | rs574552037 |
MSV3d | rs574552037 |
GWAS Ctlg | rs574552037 |
Max Magnitude | 6 |
aka c.2400C>G (p.Tyr800Ter or Y800X), and also c.2400C>T (p.Tyr800=); the former is considered in ClinVar to be pathogenic for ovarian cancer, while the latter is benign
ClinVar | |
---|---|
Risk | rs574552037(A;A) rs574552037(C;C) |
Alt | rs574552037(A;A) rs574552037(C;C) |
Reference | Rs574552037(G;G) |
Significance | Pathogenic |
Disease | Hereditary cancer-predisposing syndrome Familial cancer of breast Fanconi anemia not provided |
Variation | info |
Gene | BRIP1 |
CLNDBN | Hereditary cancer-predisposing syndrome Familial cancer of breast Fanconi anemia, complementation group J not provided |
Reversed | 0 |
HGVS | NC_000017.10:g.59793404G>A; NC_000017.10:g.59793404G>C |
CLNSRC | Ambry Genetics ClinVar |
CLNACC | RCV000164130.2, RCV000228308.2, RCV000131417.4, RCV000205848.2, RCV000254652.2, |