rs574552037
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;G) | 6 | Increased cancer risk; ovarian cancer & related |
| (G;G) | 0 | common in clinvar |
| Make rs574552037(A;A) |
| Make rs574552037(A;G) |
| Reference | GRCh38 38.1/142 |
| Chromosome | 17 |
| Position | 61716043 |
| Gene | BRIP1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs574552037 |
| dbSNP (classic) | rs574552037 |
| ClinGen | rs574552037 |
| ebi | rs574552037 |
| HLI | rs574552037 |
| Exac | rs574552037 |
| Gnomad | rs574552037 |
| Varsome | rs574552037 |
| LitVar | rs574552037 |
| Map | rs574552037 |
| PheGenI | rs574552037 |
| Biobank | rs574552037 |
| 1000 genomes | rs574552037 |
| hgdp | rs574552037 |
| ensembl | rs574552037 |
| geneview | rs574552037 |
| scholar | rs574552037 |
| rs574552037 | |
| pharmgkb | rs574552037 |
| gwascentral | rs574552037 |
| openSNP | rs574552037 |
| 23andMe | rs574552037 |
| SNPshot | rs574552037 |
| SNPdbe | rs574552037 |
| MSV3d | rs574552037 |
| GWAS Ctlg | rs574552037 |
| Max Magnitude | 6 |
aka c.2400C>G (p.Tyr800Ter or Y800X), and also c.2400C>T (p.Tyr800=); the former is considered in ClinVar to be pathogenic for ovarian cancer, while the latter is benign
| ClinVar | |
|---|---|
| Risk | rs574552037(A;A) rs574552037(C;C) |
| Alt | rs574552037(A;A) rs574552037(C;C) |
| Reference | Rs574552037(G;G) |
| Significance | Pathogenic |
| Disease | Hereditary cancer-predisposing syndrome Familial cancer of breast Fanconi anemia not provided |
| Variation | info |
| Gene | BRIP1 |
| CLNDBN | Hereditary cancer-predisposing syndrome Familial cancer of breast Fanconi anemia, complementation group J not provided |
| Reversed | 0 |
| HGVS | NC_000017.10:g.59793404G>A; NC_000017.10:g.59793404G>C |
| CLNSRC | Ambry Genetics ClinVar |
| CLNACC | RCV000164130.2, RCV000228308.2, RCV000131417.4, RCV000205848.2, RCV000254652.2, |
