rs587777465
From SNPedia
| Orientation | plus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 9 | Pontocerebellar hypoplasia type 2E |
| (C;T) | 3 | Carrier of a Pontocerebellar hypoplasia type 2E mutation |
| (T;T) | 0 | common in clinvar |
| Reference | GRCh38 38.1/142 |
| Chromosome | 17 |
| Position | 532843 |
| Gene | VPS53 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs587777465 |
| dbSNP (classic) | rs587777465 |
| ClinGen | rs587777465 |
| ebi | rs587777465 |
| HLI | rs587777465 |
| Exac | rs587777465 |
| Gnomad | rs587777465 |
| Varsome | rs587777465 |
| LitVar | rs587777465 |
| Map | rs587777465 |
| PheGenI | rs587777465 |
| Biobank | rs587777465 |
| 1000 genomes | rs587777465 |
| hgdp | rs587777465 |
| ensembl | rs587777465 |
| geneview | rs587777465 |
| scholar | rs587777465 |
| rs587777465 | |
| pharmgkb | rs587777465 |
| gwascentral | rs587777465 |
| openSNP | rs587777465 |
| 23andMe | rs587777465 |
| SNPshot | rs587777465 |
| SNPdbe | rs587777465 |
| MSV3d | rs587777465 |
| GWAS Ctlg | rs587777465 |
| Max Magnitude | 9 |
VPS53 mutation, known as c.2084A>G (p.Gln695Arg), leading to Pontocerebellar hypoplasia type 2E
| ClinVar | |
|---|---|
| Risk | Rs587777465(C;C) Rs587777465(T;T) |
| Alt | Rs587777465(C;C) Rs587777465(T;T) |
| Reference | Rs587777465(A;A) |
| Significance | Pathogenic |
| Disease | Pontocerebellar hypoplasia |
| Variation | info |
| Gene | VPS53 |
| CLNDBN | Pontocerebellar hypoplasia, type 2e |
| Reversed | 1 |
| HGVS | NC_000017.10:g.436083T>C |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
| CLNACC | RCV000128407.2, |
