rs587777612
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 8.8 | Lymphoproliferative syndrome 1 (predicted) |
| (C;G) | 5 | Carrier of an X-linked mutation for lymphoproliferative syndrome 1 |
| (G;G) | 0 | common in clinvar |
| Reference | GRCh38 38.1/142 |
| Chromosome | X |
| Position | 124346784 |
| Gene | SH2D1A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs587777612 |
| dbSNP (classic) | rs587777612 |
| ClinGen | rs587777612 |
| ebi | rs587777612 |
| HLI | rs587777612 |
| Exac | rs587777612 |
| Gnomad | rs587777612 |
| Varsome | rs587777612 |
| LitVar | rs587777612 |
| Map | rs587777612 |
| PheGenI | rs587777612 |
| Biobank | rs587777612 |
| 1000 genomes | rs587777612 |
| hgdp | rs587777612 |
| ensembl | rs587777612 |
| geneview | rs587777612 |
| scholar | rs587777612 |
| rs587777612 | |
| pharmgkb | rs587777612 |
| gwascentral | rs587777612 |
| openSNP | rs587777612 |
| 23andMe | rs587777612 |
| SNPshot | rs587777612 |
| SNPdbe | rs587777612 |
| MSV3d | rs587777612 |
| GWAS Ctlg | rs587777612 |
| Max Magnitude | 8.8 |
aka c.137+5G>C
considered pathogenic for X-linked Lymphoproliferative syndrome, type 1 in ClinVar
| ClinVar | |
|---|---|
| Risk | Rs587777612(C;C) |
| Alt | Rs587777612(C;C) |
| Reference | Rs587777612(G;G) |
| Significance | Pathogenic |
| Disease | Lymphoproliferative syndrome 1 |
| Variation | info |
| Gene | SH2D1A |
| CLNDBN | Lymphoproliferative syndrome 1, X-linked |
| Reversed | 0 |
| HGVS | NC_000023.10:g.123480634G>C |
| CLNSRC | OMIM Allelic Variant |
| CLNACC | RCV000133459.3, |
