rs587779347
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| (A;G) | 6 | Lynch syndrome, pathogenic mutation |
| (C;T) | 6 | Lynch syndrome |
| Make rs587779347(G;G) |
| Reference | GRCh38.p2 38.2/144 |
| Chromosome | 7 |
| Position | 5989957 |
| Gene | PMS2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs587779347 |
| dbSNP (classic) | rs587779347 |
| ClinGen | rs587779347 |
| ebi | rs587779347 |
| HLI | rs587779347 |
| Exac | rs587779347 |
| Gnomad | rs587779347 |
| Varsome | rs587779347 |
| LitVar | rs587779347 |
| Map | rs587779347 |
| PheGenI | rs587779347 |
| Biobank | rs587779347 |
| 1000 genomes | rs587779347 |
| hgdp | rs587779347 |
| ensembl | rs587779347 |
| geneview | rs587779347 |
| scholar | rs587779347 |
| rs587779347 | |
| pharmgkb | rs587779347 |
| gwascentral | rs587779347 |
| openSNP | rs587779347 |
| 23andMe | rs587779347 |
| SNPshot | rs587779347 |
| SNPdbe | rs587779347 |
| MSV3d | rs587779347 |
| GWAS Ctlg | rs587779347 |
| Max Magnitude | 6 |
| ClinVar | |
|---|---|
| Risk | rs587779347(G;G) |
| Alt | rs587779347(G;G) |
| Reference | Rs587779347(A;A) |
| Significance | Pathogenic |
| Disease | Lynch syndrome Hereditary cancer-predisposing syndrome |
| Variation | info |
| Gene | PMS2 |
| CLNDBN | Lynch syndrome Hereditary cancer-predisposing syndrome |
| Reversed | 1 |
| HGVS | NC_000007.13:g.6029588T>C |
| CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
| CLNACC | RCV000076905.2, RCV000132347.2, |
