rs62625308
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | Normal |
(C;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs62625308(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091924 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs62625308 |
dbSNP (classic) | rs62625308 |
ClinGen | rs62625308 |
ebi | rs62625308 |
HLI | rs62625308 |
Exac | rs62625308 |
Gnomad | rs62625308 |
Varsome | rs62625308 |
LitVar | rs62625308 |
Map | rs62625308 |
PheGenI | rs62625308 |
Biobank | rs62625308 |
1000 genomes | rs62625308 |
hgdp | rs62625308 |
ensembl | rs62625308 |
geneview | rs62625308 |
scholar | rs62625308 |
rs62625308 | |
pharmgkb | rs62625308 |
gwascentral | rs62625308 |
openSNP | rs62625308 |
23andMe | rs62625308 |
SNPshot | rs62625308 |
SNPdbe | rs62625308 |
MSV3d | rs62625308 |
GWAS Ctlg | rs62625308 |
Max Magnitude | 6 |
rs62625308, also known as R1203X, c.3607C>T and p.Arg1203Ter, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
23andMe name: i5005571
ClinVar | |
---|---|
Risk | rs62625308(G;G) rs62625308(T;T) |
Alt | rs62625308(G;G) rs62625308(T;T) |
Reference | Rs62625308(C;C) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome Neoplasm of breast not provided Familial cancer of breast |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome Neoplasm of breast not provided Familial cancer of breast |
Reversed | 1 |
HGVS | NC_000017.10:g.41243941G>A; NC_000017.10:g.41243941G>C |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000019240.13, RCV000048251.7, RCV000131818.3, RCV000148389.1, RCV000159978.3, RCV000239343.1, RCV000048250.2, RCV000112133.1, |