rs6800541
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs6800541(C;C) |
| Make rs6800541(C;T) |
| Make rs6800541(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 3 |
| Position | 38733341 |
| Gene | SCN10A |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6800541 |
| dbSNP (classic) | rs6800541 |
| ClinGen | rs6800541 |
| ebi | rs6800541 |
| HLI | rs6800541 |
| Exac | rs6800541 |
| Gnomad | rs6800541 |
| Varsome | rs6800541 |
| LitVar | rs6800541 |
| Map | rs6800541 |
| PheGenI | rs6800541 |
| Biobank | rs6800541 |
| 1000 genomes | rs6800541 |
| hgdp | rs6800541 |
| ensembl | rs6800541 |
| geneview | rs6800541 |
| scholar | rs6800541 |
| rs6800541 | |
| pharmgkb | rs6800541 |
| gwascentral | rs6800541 |
| openSNP | rs6800541 |
| 23andMe | rs6800541 |
| SNPshot | rs6800541 |
| SNPdbe | rs6800541 |
| MSV3d | rs6800541 |
| GWAS Ctlg | rs6800541 |
| GMAF | 0.259 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20062060 ]
|
| Trait | PR interval |
| Title | Genome-wide association study of PR interval |
| Risk Allele | C |
| P-val | 2E-74 |
| Odds Ratio | 3.77 [3.37-4.17] ms increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 21041692]
|
| Trait | |
| Title | Identification of Genomic Predictors of Atrioventricular Conduction. Using Electronic Medical Records as a Tool for Genome Science |
| Risk Allele | C |
| P-val | 5E-7 |
| Odds Ratio | 2.6000 [1.62-3.70] ms increase |
[PMID 23092954] SHAVE: shrinkage estimator measured for multiple visits increases power in GWAS of quantitative traits.
[PMID 25085921] Common and Rare Variants in SCN10A Modulate the Risk of Atrial Fibrillation
[PMID 25691686] Common and Rare Variants in SCN10A Modulate the Risk of Atrial Fibrillation
